Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01826 ATGGCTGGCGTTGATGATAACGTTGCCATAATTGGTGACTGGGTGCCTCCAAGCCCCAGTCCAAGAACATTTTTCTCTTCGTTGTTGGGGGATGATATGTGCTCAAGATCGATATCAGAACCTCCTGGAAATAGTAGAAAAGAGGATATTTTCTCAGGATCACAAGAATTTATTCAAACAGCAAAGTCCAATCTGAACAACGTGGCCTTTGGTCCTCTCTCTGGTGATAATATGACTCGACCAAGTTCACTTTCTGATCAAAGACCATGTTTTCGTGGGGGTCTACTGGATAGGAGAGCTGGATTTAATGCTCCTAGGTTGAACACAGAAAATATTAGATCGTCCGAGGTTTCACATAACTCAGACATCCAATCTCCTTATTTGACCATACCACCAGGTCTCAGCCCCACTTCACTTTTGGAATCTCCTGTTTTTCTTTCAAATTCTCTGGCCCAGCAGTCACCTACAACTGGAAAACTTGCATTTATCTCAAATGGTGATGTTCAGAGCAATGCATTGGCTTCAGTTGCTTGTGATAAAAGTAAAGATGGTGACTTTGATGATATGGATACTTCGTTTGCTTTTAAGCCTGCAGCAGAACCAGGATCGTCTTTCTCTTTTGGTGTATCAAGCAAAATGACTCCAGCTACTCAGCAATCCCTTCCGCAATGTGAGGTCTCTGCTCAACCAGAGAAGTCCCACCAGTCTCAAAGTACAAACACAATCCAAACTCAAGATAGAAAGGGGCTTCAACTGCCGGCACACTTTTCCAATTTGTCAACTGAAAAGGATTATAAAGTTAATATTTCTGATATTGTTGGTAGCAGTGGAGGACTTTCCCCACCGTTTGATGAGCAACCTGATGAAGAGAGAGATCCAAGAGGATGTGGAGACTCCATGGTCAATGGTGCTAGTGGTACACCATCAGAGGATGGCTATAACTGGAGAAAATATGGACAAAAACAAGTTAAAGGTAGTGAATATCCTCGAAGTTATTACAAGTGTACACATCCAAATTGTCAAGTTAAGAAGAAAGTGGAGCGATCTCATGAGGGTCACATTACAGAGATCATTTACAAGGGTGCACATAATCACCCCAAACCGCCTCCCAATCGCCGTTTAGCAATAGGATCGTTTAGTCCTCTCGCTGACATGCAGTTCGATAACTCTGATCAAATGGGAGCACCAAGTGGTCCTGACGGTGATCCAGGTTTTGCATCTGCCAAAAAGGGAGCAATAGCTGGAACAATGGACTGGAAGCATGAAAATCATGAAGCCACTTCATCTGCTTCAGGTGGACCTGAATACTGTAATCAATCTACTCCTCTGCAGGCTCCAAATGGTGTTCAAGTAGGATCTATGGATGCAGTGGATGTGTCGTCTACTTTCTCCAATGAAGATGAAGATGATAGGGGAACTCATGGTAGCGTATCATTAGGAAATGATGGGGAAGGAGATGAATCAGAGTCAAAAAGAAGGAAACTTGAGTCTTATGCTACAGACATGAGTGGAGCCACTAGAGCTATTCGTGAGCCAAGAGTTGTAGTCCAGACAACCAGTGAAGTGGATATCCTTGATGATGGATATCGGTGGCGTAAATATGGGCAAAAAGTAGTGAAGGGAAATCCAAACCCAAGGAGTTATTACAAATGCACCAATGCTGGCTGCACTGTGAGGAAACATGTGGAGAGGGCCTCACATGATCTGAAGTCTGTTATCACCACATATGAGGGCAAGCACAACCATGATGTCCCTGCTGCTCGCAGCAGCAGTCATCTCAATGCCAGTGCTTCCAACATTGCATCTGCCCAAGGTGCAGCCGCTGCAATTCAAGCCCATGTTCTGAGGCCTGAGTCCTCACAAGTTCACAATAGCATTAGAAGGTATGAAAATCCAGCTCTGGGCTCATTCGATCTAGCTGGAAGACAGCATGTGGGGTCTTCTCACGCCTTCTTTGGTATGAATCAAAATGGCCTGGCCAACATGGCTATGGGGGGGTTCGCAAGCACCCGACCCACGCTTCCCGTAATGCCTGTCCACCAATATCTGAGGCACCCACGTCCATCAAATGAAATGAGTTTTGTATTGCCTAAAGGAGAACCGAACTCGGAGAATATTCCAGGTCCCACTCTGAATTTGTCAACTGGCTCGTCAGTGTATCAACAAATGATGAGCAGGCTGCCTCTTGGACCTCAGATGTAA 2202 0.45 MAGVDDNVAIIGDWVPPSPSPRTFFSSLLGDDMCSRSISEPPGNSRKEDIFSGSQEFIQTAKSNLNNVAFGPLSGDNMTRPSSLSDQRPCFRGGLLDRRAGFNAPRLNTENIRSSEVSHNSDIQSPYLTIPPGLSPTSLLESPVFLSNSLAQQSPTTGKLAFISNGDVQSNALASVACDKSKDGDFDDMDTSFAFKPAAEPGSSFSFGVSSKMTPATQQSLPQCEVSAQPEKSHQSQSTNTIQTQDRKGLQLPAHFSNLSTEKDYKVNISDIVGSSGGLSPPFDEQPDEERDPRGCGDSMVNGASGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHNHPKPPPNRRLAIGSFSPLADMQFDNSDQMGAPSGPDGDPGFASAKKGAIAGTMDWKHENHEATSSASGGPEYCNQSTPLQAPNGVQVGSMDAVDVSSTFSNEDEDDRGTHGSVSLGNDGEGDESESKRRKLESYATDMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARSSSHLNASASNIASAQGAAAAIQAHVLRPESSQVHNSIRRYENPALGSFDLAGRQHVGSSHAFFGMNQNGLANMAMGGFASTRPTLPVMPVHQYLRHPRPSNEMSFVLPKGEPNSENIPGPTLNLSTGSSVYQQMMSRLPLGPQM* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01826 733 MobiDBLite consensus disorder prediction 423 449 - -
Pte13g01826 733 SUPERFAMILY WRKY DNA-binding domain 307 368 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 MobiDBLite consensus disorder prediction 484 498 - -
Pte13g01826 733 MobiDBLite consensus disorder prediction 426 449 - -
Pte13g01826 733 SUPERFAMILY WRKY DNA-binding domain 517 585 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 ProSiteProfiles WRKY domain profile. 304 368 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 Gene3D WRKY domain 299 369 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 140 604 IPR044810 GO:0003700
Pte13g01826 733 MobiDBLite consensus disorder prediction 462 500 - -
Pte13g01826 733 ProSiteProfiles WRKY domain profile. 520 585 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 FunFam WRKY transcription factor 299 369 - -
Pte13g01826 733 MobiDBLite consensus disorder prediction 206 250 - -
Pte13g01826 733 FunFam WRKY transcription factor 33 512 578 - -
Pte13g01826 733 Pfam WRKY DNA -binding domain 526 582 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 Pfam WRKY DNA -binding domain 310 366 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 SMART WRKY_cls 309 367 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 SMART WRKY_cls 525 584 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 Gene3D WRKY domain 512 578 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01826 733 MobiDBLite consensus disorder prediction 384 409 - -
Pte13g01826 733 MobiDBLite consensus disorder prediction 272 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01826 Pte-Chr13 30953138 30958172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01826 1 728 WRKY Transcription Factor Family AT5G56270 47.775 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte13g01826 WRKY 3.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01826 K18835 - cave:132174897 937.562