Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01821 ATGTTACTGAAGAAGCTGTGGGAATCGGTACGGTGGAGCCGATCTTGCAATTCGAAAGGCTTAGCACGCCAATACTCCACGGACATAGAAAACCTGTATTCCTCTTCTCTTGGAGATTTCGATTGCATCCCTTGCGATTTGCTGTTGCAGATTCTCCGATTCCTTGGCCCTAAACAAGCTGCCAAATTGAGCCTCCTTTCCAAGGCTTGGAGGTCTCTCGTCTCCGATGATCGCCTCTGGATTTACTTCCTTCAGAGTCAGGATCTTGTTCATGATCAAAGCTCCTACCCATATTCGTGGGACTCCGTTTTTTTTGCCGAGACCAACTTGAGACTCGGTTACCCTCTTCTACAAACCTCAATATCTCAATTATCTTTCATGGATATATATAGTCAACGTACACAGGTACCAGGCTCTGTAATAATTGATGGTGGTTCTGGATATTGTAAGTTTGGTTGGAGCAAATACGCAGCTCCATCAGGACGTTCAGCAACCTTTTTGGAATTTGGTAACATCGAATCTCCTATGTACACTAGACTTCGTCATTTTTTTGCAACCATCTACAGCAGGATGCGAGTGAAACCAAGTATACATCCAGTGATTATTTCCTTACCACTCTGCCATTATGATGATACTGAATCTGCCAGGGCATCAAGAAGACAGCTTAAAGAAGCAATCTTTGCAGCTATGTTTGACATGAATGTCCCCGCCATTTGTGCTATCAATCAGGCGACATTGGCTTTATATGCTGCAAGAAGAACTTCAGGAATAGTTGTCAATATTGGTTTTCAGGTCACTTCTGTTGTTCCAGTCTTAAATGGAAAAGTGATGCGTAAAGTGGGTGTGGAAATTGTTGGAGTGGGAGCACTGAAATTGACAGGGTTTCTGAGGGAGCTAATGCAACAAAACAACATAAACTTCCAGTCTCTTTATACAGTTCGCACATTGAAAGAGAACATGTGCTATGTTGCTGCTGACTATGAAGCTGAGTTATGTAAAGACACACAAGCATCATTTCAATCTGGGGCAGAAGGCTGGTACACTCTTTCCAAAGAACGATTCCAGACAGGAGAAATTTTGTTCCAGCCACAACTGACTGGAGTGCGTGCAATGAGTTTACACCAGGCTGTCACACTTTGTATTGACCACTGCCATTCTGCAGAATTAACTGGTGATGATGCTTGGTTTAAAACTGTGGTCTTGTCGGGGGGTACTGCATGTTTACCTGGTCTAGCAGATAGATTGGAGAAAGAACTGCGAGAATCACTTCCCCAACATCTGTCAAATGGAATTAAAGTCATTCCTCCTCCATATGGTGCGGATACAGCATGGTTCGGGGCAAAGGTTGTTGGTAATGTAAGTAGTAAAGAATTGTTCAACTTAAAATCATTATTTTCTTTTGCTTCCATGGAGTCTGCCTAA 1422 0.4297 MLLKKLWESVRWSRSCNSKGLARQYSTDIENLYSSSLGDFDCIPCDLLLQILRFLGPKQAAKLSLLSKAWRSLVSDDRLWIYFLQSQDLVHDQSSYPYSWDSVFFAETNLRLGYPLLQTSISQLSFMDIYSQRTQVPGSVIIDGGSGYCKFGWSKYAAPSGRSATFLEFGNIESPMYTRLRHFFATIYSRMRVKPSIHPVIISLPLCHYDDTESARASRRQLKEAIFAAMFDMNVPAICAINQATLALYAARRTSGIVVNIGFQVTSVVPVLNGKVMRKVGVEIVGVGALKLTGFLRELMQQNNINFQSLYTVRTLKENMCYVAADYEAELCKDTQASFQSGAEGWYTLSKERFQTGEILFQPQLTGVRAMSLHQAVTLCIDHCHSAELTGDDAWFKTVVLSGGTACLPGLADRLEKELRESLPQHLSNGIKVIPPPYGADTAWFGAKVVGNVSSKELFNLKSLFSFASMESA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01821 473 Gene3D - 244 442 - -
Pte13g01821 473 Gene3D - 180 455 - -
Pte13g01821 473 Pfam F-box domain 40 81 IPR001810 GO:0005515
Pte13g01821 473 CDD NBD_sugar-kinase_HSP70_actin 140 284 - -
Pte13g01821 473 ProSiteProfiles F-box domain profile. 37 83 IPR001810 GO:0005515
Pte13g01821 473 PANTHER ACTIN 181 454 IPR004000 -
Pte13g01821 473 SUPERFAMILY Actin-like ATPase domain 139 259 IPR043129 -
Pte13g01821 473 SUPERFAMILY F-box domain 38 87 IPR036047 GO:0005515
Pte13g01821 473 Gene3D Actin; Chain A, domain 4 287 370 - -
Pte13g01821 473 Pfam Actin 186 453 IPR004000 -
Pte13g01821 473 Gene3D - 23 114 - -
Pte13g01821 473 SUPERFAMILY Actin-like ATPase domain 253 455 IPR043129 -
Pte13g01821 473 SMART fbox_2 43 83 IPR001810 GO:0005515
Pte13g01821 473 SMART actin_3 137 465 IPR004000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01821 186 455 Cytoskeleton Gene Families AT3G12110 31.183 5.91e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01821 K16616 - qsa:O6P43_013433 692.189