Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01812 ATGTTCGGAGCCCCGTCTCTGTCGAGGATCCTCGCCTGTACCTGTACGCCCCTCCTGAACCTGAACCAAACCCAAACCTCTAGTCGCCCGGTGGCTTTCAATCCTAGCTCGTCCAGATTTTCCTATCGCTTCCAAGCGTCTTGCCGGTCAACATTCGAGGAACGTACCCCTCTCGTCCATGCGGGCAGGAAGGTATCCACTCTGTACGATGTGCTCCGCGTGAACAAGAACGCTTCGCCGGTCGAGATCAAGTCGGCTTACAGGAGTTTGGCCAAGATGTACCACCCGGATGCGAATTCAAATGCTCATGTTCATGATTGTTCCAATAAATCTGACGCAGTAGATTTCATCGAGATACACAATGCATATGCTACACTCTCTGATCCATCTGCAAGAGCAATCTACGATCTCTCGCTTTCTCTACATCCTCACATGACTGCCAGAGGTGAGTCGCTAAAGGAAAACATGATATCCGGGTTTTACCCGACCCGACGATGGGAAACGGACCAGTGCTGGTAG 519 0.5164 MFGAPSLSRILACTCTPLLNLNQTQTSSRPVAFNPSSSRFSYRFQASCRSTFEERTPLVHAGRKVSTLYDVLRVNKNASPVEIKSAYRSLAKMYHPDANSNAHVHDCSNKSDAVDFIEIHNAYATLSDPSARAIYDLSLSLHPHMTARGESLKENMISGFYPTRRWETDQCW* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01812 172 PRINTS DnaJ domain signature 111 131 IPR001623 -
Pte13g01812 172 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pte13g01812 172 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pte13g01812 172 SUPERFAMILY Chaperone J-domain 66 142 IPR036869 -
Pte13g01812 172 Gene3D DnaJ domain 59 159 IPR036869 -
Pte13g01812 172 Pfam DnaJ domain 68 136 IPR001623 -
Pte13g01812 172 SMART dnaj_3 66 131 IPR001623 -
Pte13g01812 172 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
Pte13g01812 172 ProSiteProfiles dnaJ domain profile. 67 139 IPR001623 -
Pte13g01812 172 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 27 172 - -
Pte13g01812 172 CDD DnaJ 67 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01812 Pte-Chr13 30812895 30813675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01812 69 136 C2H2 Transcription Factor Family AT1G74250 44.118 8.55e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01812 - - qsa:O6P43_021358 152.525