Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01800 ATGGAGAAAAACATCATGAGAGGTGTGATGGATCAGCAGAGAAACTATGAACACGCCCAATACAGTAATGTTGAAAATAGAATTGAGGGGACTCGGTCTGAAGGCAGAAGGTTTTTAAATGATCCATCAATTAATGTAAATGCTAACATGCGACCTCCAGACTCCAATATGTCTTTTAACAGCAGGCCTGTGAATTTCTCAATTCAGACTGGTGAAGAATTTTCTCTCGAGTTTATGCGAGAGCGAGTGAATCCCAGACCACAGTTTGTGCCTAATGCTTATGCCGACCCTAACAGTGCATCACGCTACATGGAACTGAAAGGCCTACTGGAAATTTCTCATGCTGGTTCTGATACTGGTTCAAGTGTGTTTAGTTCTGTAGAAAGAGGGAATGCTCAGGATCTTCGGAGGAAAGGATCTCCTTCTCATGAAGTAATTTATCATGATTCAGTGAGATCAGTTCCTAGAGCTTCATCTCAGAATGATATAAATCGGAAAATTCACAGTTTTACTGCATCAGGATCTTCAGATAGGTCTCCTAATAAGGTTAAGTTCCTATGTAGCTATGGTGGAAAAATTTTACCACGTCCCAGTGATGGAAAGCTTAGATATGTTGGAGGCTTGACACGTATTATCAGTGTAAGCAAGGATATTTCCTGCTTTGATTTGATGCAGAAAGCCTTGTCACTTTACAGCCAGACTTGTGCAATAAAATATCAGCTACCTGGTGAGGATCTTGATGCATTAGTTTCTGTTTCTTGTGATGAGGACCTGCAGAACATGATGGAGGAATTTGGTGTTTTAGATGGAGGTTCACAGAAACCTAGGCTGTTTTTATTTTCTGATAAGGATTTAGAGGATGTCCAGCTTGGCCTGGATACAACAGAAGATGATTCTGAGATGCAATACGTGGTTGCTGTAAATTGCATGGACCTAGGTTCACGAAACAACTCAGTTGCATTGGCTAGCACTCCAGGTAGTAATTTGGATGAGTTACTCACCTTAAGCGTTGAACCTGGTAACCTAAGAGTGGAGCAAGAATCTGTTAAAGCTACCATTGCACCGGAGATGATTAATGTGCCGTCTAAAGTGCTTACATCATCTTCATTGATGGTGTCAAATGTATCTCACACACTTGAAATGAATCCTAAGTTTTACTCAGGACCGAAGATATTTCATGGGAGGAGTGACCTTTCTGCTCCATTGCCATATGGCCTGCACTATACAACTTCTGCTGAAAACGTATCTGCATTTTTTGCAGATGGACATCTAGACCATCAGGCAGATTTAGCTGAACGGATCGAAAGTGGGTCTGTTACAGGAGATTTACATTTATCTGGAATGGAGGTAAAACTGAATAGGAACAGCTCAGGTCGGAAAATAAATGAGGAACATTCAATAAAGGATTCAAAGATGAAAAGGGAGAGGTCACTCCAAAAAGTAGATGAACCTGCAAAGGATCAGAATTTTGACAATGGCTGTACTGCTTCCTTGCATCCATATGATAGTTCCATTGAAGAACGACTTCCTAGACAAGAAGTTACAGTTCCTAGTACAGTAGCTGAATCGATTTCACCTGGAAGTGGCTATGAACTTGGGCATAATTCAGTATCTGCTGAAGATGTTGATGGAAATAACAACAATAATGGCCAATCACACACGTCCACTGGAATGATTACTCCAGGGTATATTAGTTCTGATGCTGATCCTACTCACTTAAACAATTTTGGGGCTTCTACAGCTCCTCGCCCAACTTTTCATTCCGAGCAACTTCCTCGTGAGCTTGCTGAGCTAAACCGTTTGTCAAAATCTGAGGATTCTTTTGGTTCTCATTGTCTGATAAAACAAGCTCTCTTGGATAACTCTAATTCAAATACAGAACCATTGGAGAGATTACTCGATGGAAATGTAATCTTACAGGCTGATCAGTCTGTTTCATCATCAAAACCATTGAACAATAACTCACGGAAGATTGATGGTGGATCACTGCAACTTCATGATTCTATACCACTGCCTGCGAATATCAGTGAGACAAGCAGAGAGGGCATTGTGCCAAAGTTGCAGAAATCTGAACTGATGCACCCTGTACCTTATCCTGTGGATGATTTTGAAAGGATCCATGCTGATGGAAATAGCTATAGAGATTCCAGACTGACTTATAAAGATATATCTGGTAAAGGAACTTCTGGAGCCTCTGGTTTTACACAACAGAAATTTGACTTGAACGATCCAGTTACCCATAACATCAATGCTAGCAAAGGCCACACCGAGCCGTTGGTCTATGCAGAGCGCCCTGTGAAAGCAACTGCTGAAGGGCATTCTATCATTGATGGCAAGAATCAAGAACGAAGAGACATTCTCATTGATATAAACGACCGCTTTCCTCGTGACTTTCTTGCTGATGTATTTTCACAAGCTCAAGACTCTCAGAATCCTGTTGTTTTTAGCCCCCTTCATGGTGATGGAACTGGCTTAAGCTTGAATATGGAGAACCATGAACCTAAACATTGGTCATACTTCCGAAATCTTGCACAGGATGAATTTGTTAGAAGCAATGTTTCCCTCATGGACCAGGACCATCCAGGTTTCTCAGCTCCAGTAGCAAATGTTAGGGAACAGCCTCCTGTAGATTATGGTTTCTTTCCTGTAAAATCTGATGGAGCAACTACGCATAACATGAATTTGCAGCTGAAATATAATGAGGAGTATCAGCAAGCACCATCAGATGTGATCGAATCACACGCAATGAATGCAGCTGCTACTTATAATCCAACCCAGCTCAAGGGAAATGAAAGTGCGCAATTGGATGAATTAACTGCCAGAGTGCAGTCAGACTATGAAGTTGGGCAGTTGGATGTTTTAAATGCTGGTGCACCTGTAACTGATCTTCCATTTGCAGATTTTGATCTTACTTCATTACAGATAATAAACAATAAAGATCTTGAAGAGTTGAGGGAGCTGGGTTCTGGCACATTTGGAACTGTTTATCATGGTAAATGGAGAGGTTCAGATGTCGCCATAAAGCGGATTAAGAAGAGCTGTTTCACAGGTCGATCATCTGAGCAAGAACGACTGACAAATGAATTTTGGCGGGAAGCTGAAATTCTTTCAAAGCTGCACCATCCGAATGTAGTGGCATTTTATGGTGTTGTGCAGAATGGACCTGGAGGGACGCTGGCTACTGTGACAGAGTTTATGGTTAATGGATCTCTCAGGAATGTTTTGGTTTGCAAAGACAGGCACCTTGATCGTCGAAAACGTCTAATAATTGCAATGGATGCTGCTTTTGGCATGGAATATTTGCATTCAAAGAACATCGTGCATTTTGACTTGAAGTGTGACAATCTGCTTGTCAATTTGAAAGATCCTGTACGGCCCATCTGCAAGGTAGGAGATTTTGGCTTGTCAAAGATTAAGAGAAATACACTAGTCACAGGAGGTGTTAGGGGAACTCTTCCTTGGATGGCTCCAGAGCTTCTGAATGGTAGCAGCAGCAAGGTTTCTGAAAAGGTCGATGTTTTTTCTTTTGGCATTGTATTGTGGGAAATCCTTACTGGGGAGGAACCTTATGCCAACATGCATTATGGAGCAATCATAGGTGGAATAGTGAATAATACACTAAGACCTACAGTTCCTAGTTCCTGTGACCCTGAATGGAGGCTGTTGATGGAGCAGTGCTGGGCACCTGATCCCGCTGCGCGCCCTTCATTCACTGACATAGCCAGGCGTTTGCGCATGTTGTCTGAGCTTGCCAAAGTAAACAAACAGAATCTGCTGGCAAAGTCATGA 3789 0.4199 MEKNIMRGVMDQQRNYEHAQYSNVENRIEGTRSEGRRFLNDPSINVNANMRPPDSNMSFNSRPVNFSIQTGEEFSLEFMRERVNPRPQFVPNAYADPNSASRYMELKGLLEISHAGSDTGSSVFSSVERGNAQDLRRKGSPSHEVIYHDSVRSVPRASSQNDINRKIHSFTASGSSDRSPNKVKFLCSYGGKILPRPSDGKLRYVGGLTRIISVSKDISCFDLMQKALSLYSQTCAIKYQLPGEDLDALVSVSCDEDLQNMMEEFGVLDGGSQKPRLFLFSDKDLEDVQLGLDTTEDDSEMQYVVAVNCMDLGSRNNSVALASTPGSNLDELLTLSVEPGNLRVEQESVKATIAPEMINVPSKVLTSSSLMVSNVSHTLEMNPKFYSGPKIFHGRSDLSAPLPYGLHYTTSAENVSAFFADGHLDHQADLAERIESGSVTGDLHLSGMEVKLNRNSSGRKINEEHSIKDSKMKRERSLQKVDEPAKDQNFDNGCTASLHPYDSSIEERLPRQEVTVPSTVAESISPGSGYELGHNSVSAEDVDGNNNNNGQSHTSTGMITPGYISSDADPTHLNNFGASTAPRPTFHSEQLPRELAELNRLSKSEDSFGSHCLIKQALLDNSNSNTEPLERLLDGNVILQADQSVSSSKPLNNNSRKIDGGSLQLHDSIPLPANISETSREGIVPKLQKSELMHPVPYPVDDFERIHADGNSYRDSRLTYKDISGKGTSGASGFTQQKFDLNDPVTHNINASKGHTEPLVYAERPVKATAEGHSIIDGKNQERRDILIDINDRFPRDFLADVFSQAQDSQNPVVFSPLHGDGTGLSLNMENHEPKHWSYFRNLAQDEFVRSNVSLMDQDHPGFSAPVANVREQPPVDYGFFPVKSDGATTHNMNLQLKYNEEYQQAPSDVIESHAMNAAATYNPTQLKGNESAQLDELTARVQSDYEVGQLDVLNAGAPVTDLPFADFDLTSLQIINNKDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFTGRSSEQERLTNEFWREAEILSKLHHPNVVAFYGVVQNGPGGTLATVTEFMVNGSLRNVLVCKDRHLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPVRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSSKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTVPSSCDPEWRLLMEQCWAPDPAARPSFTDIARRLRMLSELAKVNKQNLLAKS* 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01800 1262 Gene3D - 201 282 - -
Pte13g01800 1262 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 202 282 - -
Pte13g01800 1262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1106 1118 IPR008271 GO:0004672|GO:0006468
Pte13g01800 1262 MobiDBLite consensus disorder prediction 644 661 - -
Pte13g01800 1262 MobiDBLite consensus disorder prediction 456 475 - -
Pte13g01800 1262 MobiDBLite consensus disorder prediction 539 563 - -
Pte13g01800 1262 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 974 1068 - -
Pte13g01800 1262 MobiDBLite consensus disorder prediction 536 563 - -
Pte13g01800 1262 MobiDBLite consensus disorder prediction 24 61 - -
Pte13g01800 1262 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1069 1260 - -
Pte13g01800 1262 PRINTS Tyrosine kinase catalytic domain signature 1215 1237 IPR001245 GO:0004672|GO:0006468
Pte13g01800 1262 PRINTS Tyrosine kinase catalytic domain signature 1100 1118 IPR001245 GO:0004672|GO:0006468
Pte13g01800 1262 PRINTS Tyrosine kinase catalytic domain signature 1063 1076 IPR001245 GO:0004672|GO:0006468
Pte13g01800 1262 PRINTS Tyrosine kinase catalytic domain signature 1171 1193 IPR001245 GO:0004672|GO:0006468
Pte13g01800 1262 MobiDBLite consensus disorder prediction 455 475 - -
Pte13g01800 1262 SMART PB1_new 197 282 IPR000270 GO:0005515
Pte13g01800 1262 SUPERFAMILY Protein kinase-like (PK-like) 971 1244 IPR011009 -
Pte13g01800 1262 Gene3D Transferase(Phosphotransferase) domain 1 1069 1261 - -
Pte13g01800 1262 MobiDBLite consensus disorder prediction 117 142 - -
Pte13g01800 1262 SMART serkin_6 981 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01800 1262 PANTHER SERINE-THREONINE PROTEIN KINASE 248 1247 - -
Pte13g01800 1262 MobiDBLite consensus disorder prediction 38 61 - -
Pte13g01800 1262 ProSiteProfiles Protein kinase domain profile. 981 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01800 1262 Gene3D Phosphorylase Kinase; domain 1 974 1068 - -
Pte13g01800 1262 MobiDBLite consensus disorder prediction 644 664 - -
Pte13g01800 1262 Pfam PB1 domain 199 281 IPR000270 GO:0005515
Pte13g01800 1262 CDD STKc_MAP3K-like 987 1244 - -
Pte13g01800 1262 Pfam Protein tyrosine and serine/threonine kinase 982 1244 IPR001245 GO:0004672|GO:0006468
Pte13g01800 1262 ProSitePatterns Protein kinases ATP-binding region signature. 987 1012 IPR017441 GO:0005524
Pte13g01800 1262 CDD PB1_UP2 186 280 - -
Pte13g01800 1262 SUPERFAMILY CAD & PB1 domains 198 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01800 Pte-Chr13 30673581 30680575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01800 10 516 MAP Kinase Kinase Kinase AT2G35050 39.633 1.98e-85 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pte13g01800 PK_Tyr_Ser-Thr 2.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01800 - - qsa:O6P43_034402 1420.22