Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01796 ATGAGCGAGCTCTCATACTCATACTCCAAATGGTTTCCTCAACCTCAAACTCAAATGCCCCCTTGTCCTCAGACTATGCTTTTCCTCAGTTCCAAGTGCCCTTTTCCCACCTCCTATTCCAGCACTCACATCCCTCGGCATCATACCTTAACAGTTTGTATATTCTCCAGTAATTATCGCAGGCAACCTTTGCCTTTCTCAGTTTCCATTGCCCGAAGCACTTGTTCAAGACACAGCTGTCCTTTTGGTGCATGGGATGACGTTCCTGTACTTACTAAAGCAACAGTAGGAAAAACAAGCAAAGAACTTGTTTTCAGTTATGTAGCCACTGGAAAAATGTCGGGATCATGCCAATCTGTGTGCATCTGCAATGAATTTTTCGCATTCAAATCCCATTCTCATTCTCCCAAACATAGCAATCCTCCACTTTCTTATTTGCGAGACCTTAACTTTGCTGTATTTGCCTCCAGGACATCAGTCTCAACCTTACATAAGCCTAACAAACCAAAATATAGTCTCTCAGTAACCCCTCCAAACTTGCATCCACCCTTTCCTCCTAAATCAAAGTCAGATTTCGAGGAAAAAGTGCTGTTTCTTGACTCTATTGGTCTTGACTTCTTTGCAATTGTCCAAAAATGTCCTTTGCTTGCCTCTGCTTCTCTTGCTGACATGAAAGGTGTAGTAAATTTGATGACTTCTATGGACTTCACTGCACTTGAGTTTAAGAGAATTGTGGGGATGTGTCCAGAGATTTTCACCTTGCGTGTTTCGGACATTGCACCTGTGTTCACCTTCCTTCTGCGAGAGGCTCATGTGAATGGTACAGATGTCAAAAGAGTTATCAACAGGCGTCCAAGGTTGCTTGTTTGCAGCGTCAAAGACCAGCTTCGCCCTACATTGTACTTCCTTCAAAGCATTGGCATAGAAGAGGTAAGCAGGCACACATACTTGCTATCTTGTAGTGTTGAAAATAAGCTTATACCCAGAATCGACCATGTGGAAAAGATTGGGTTTTCTCGACGTGATGCTATTTCTATGTTTCGGAGATTTCCTCAACTCTTCTGTTACAGCGTTAAGGAAAATCTGGAGCCAAAGTTCAACTACTTTGTAATGGAAATGGGGAGAGATTTGAAGGAGCTAAAAGAGTTTCCACAATACTTTTCATTTAGCTTAGAGAATAGGATTAAGCCTAGGCATAAATTTTGCCTAGAGATGGGGGTGTATTTTACTCTCCCTATATTATTAAAGACAAGTGAATCTCAATTCCGCAAAAGATTAGAAGTCTGCTGTAATTCTTCCATTCCATTAAGATCATCTCCTTTATGGTCTGCAACTTGTGAAATTGATTCAGTATAA 1356 0.413 MSELSYSYSKWFPQPQTQMPPCPQTMLFLSSKCPFPTSYSSTHIPRHHTLTVCIFSSNYRRQPLPFSVSIARSTCSRHSCPFGAWDDVPVLTKATVGKTSKELVFSYVATGKMSGSCQSVCICNEFFAFKSHSHSPKHSNPPLSYLRDLNFAVFASRTSVSTLHKPNKPKYSLSVTPPNLHPPFPPKSKSDFEEKVLFLDSIGLDFFAIVQKCPLLASASLADMKGVVNLMTSMDFTALEFKRIVGMCPEIFTLRVSDIAPVFTFLLREAHVNGTDVKRVINRRPRLLVCSVKDQLRPTLYFLQSIGIEEVSRHTYLLSCSVENKLIPRIDHVEKIGFSRRDAISMFRRFPQLFCYSVKENLEPKFNYFVMEMGRDLKELKEFPQYFSFSLENRIKPRHKFCLEMGVYFTLPILLKTSESQFRKRLEVCCNSSIPLRSSPLWSATCEIDSV* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01796 451 FunFam Transcription termination factor MTEF1, chloroplastic 266 430 - -
Pte13g01796 451 Gene3D Transcription termination factor 3, mitochondrial 258 430 IPR038538 -
Pte13g01796 451 SMART mt_12 344 376 IPR003690 GO:0003690|GO:0006355
Pte13g01796 451 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Pte13g01796 451 SMART mt_12 207 237 IPR003690 GO:0003690|GO:0006355
Pte13g01796 451 SMART mt_12 377 408 IPR003690 GO:0003690|GO:0006355
Pte13g01796 451 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Pte13g01796 451 SMART mt_12 310 339 IPR003690 GO:0003690|GO:0006355
Pte13g01796 451 PANTHER CGI-12 PROTEIN-RELATED 136 429 IPR003690 GO:0003690|GO:0006355
Pte13g01796 451 Pfam mTERF 267 422 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01796 Pte-Chr13 30635764 30637865 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte13g01796 mTERF 7.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01796 K15031 - vvi:100254596 411.764