Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01769 ATGGAGTTTCTGGTGAAGCTCGTGGCTGGCAAGGAGAACTGTTTTGTGTCACTTCCACTTCCTCTAATCCAAACACTTCAGTCCACAAGCTCCGGTCAGCTACCTTCTCTTCTTGCTCTCGAACTTCGGTCAAATAACAACCACTGGGTTGTTGCTTGGGCTGGCGATTCGTCAGCTTCTTCTGCCATAGAGGTTTCACACCAATTTGGGGAATGCATTGGTTTGACCCATAATGCTAGTGTTAAAGTGAGAGCTGTCTCTAATGTAACACATGCCACACTTGTTACAATAGAACCAGACACTGAGGATGACTGGGAAGTTTTGGAGCTCAATTCAGAGCTTGCTGAGGCAGCAATATTGAAGCAGGTGAGGATTCTCCATGAAGCAATGAGATTTCCTTTGTGGTTGCATGGGCGCACTGTTCTTACCTTCCATGTGGTTTCTATCTACCCGAAGAAAGCGGTGGTGCAACTCATGCCTGGAACTGAGGTTGCAGTAGCTCCAAAGAGGCGCAAGAAAAATCTGGATTCAGATATAGATTCTTCTCTGGAATCATTAGGTGCAGAATGCAATTCTACAAAAGCAGTCCTACGCATTCAAGAGTCAGATAGAAGATTCATCAGCAATGCTAATGCCATAGGTGTTAATCTTGGTGTGGTACTTACTTCCGTGGGTTTCGTACATCCGGAGACCGCTAAAAGCTTATCGTTGGTGATGCTTCAATCATTTCTTGTAGTTCCCAGGTTTTCCAAGGAGAGTCTTAAAGTTTCTGGAAGCAATATCTCCAAAACTAAAAGTGACTTGGTTGCTAAGGTAGTTGATGATCAAAATTTAACCGACAAGAAAGAATATCGACAAGCAGTTGTTCATATTATCATTTCTGATTCTGTTGCTAAAGGGCATTTAATGGTTGCTCGGTCTCTTCGGCTTTATCTTCGAGCTGGTTTACACTCATGGGTTTTGCTGAAGGCATGCGATGCTAATGAAAAGGAAATTCCCTCAGTTTCTCTCTCTCCTTGTCACTTTAAACTAATGAGGCAGGAGAACATTCACAATAAAAATGATCTAGAAGTTCTTGATAATCGTAAGATTCATAAGAAAAAGATGCATAAGAAGACTGGCTCAGAACTCTACATGGATATTGGAGACTGGTCTCATCATGATGACGTGATTACTATTTTATCTAAGACACACCATCACAAAAGCGATGAAGATGCAGCTTATCAATCTGCCTCCGGAGTAGGCATACAGAATCTTGTTTTGGCATGGTTTTCCGCACAGCTTGAAGCGATTAGTTCCATTTCTGGGATTGAGGTTAATTCACTTATATTGAGTCGTGAGACGTTGTTTCACTTTGAAGTTAACTGCTACACTGAAAACAAAAGCCATGCTTCGTCCAATAGTTCATTGGAGGACAGAGACAACATGGTGCAAATTTTGTATATATTGACGTTAAATGAGGAGTCTTTCTATGACAGAACGGTCAAAGCATACAAGGTTAGCTTCGGTGAAAGAAAGAAGATTATAAATGATCCGGGCGATTTTAGACTCTTTGAAAAGATAAAATGCGGTGACCCTGTGTCATTCTCCTGTAATGAAGAAAGAGTCTATGAGTCACATGACAGTTTAGATATAACTTCAATTGGTTGGATGGGGCCTATTGCTTCTGATGTTTTTAATAGGCTGTCTCTGTTGTTATCTTCATCAAGTGGTTTCTGGTTCCATTCACATAATTTGCCTTTTCCTGGACATATTCTAATATATGGACCTTCGGGTTCTGGAAAAACATCGTTGGCAAAGGCTGCTGCAAAATCACTTGAGAATCATGGGGAGATTTTAGCACATACAATATTTATAAATTGCTCGAGATTTAATTCAGAAAAGATTCCAGCAATACGTGAAGCTATTTCAAGCCATATTTGTGAGGCCTTGAATCATGCACCATCCATTGTCATTTTTGATGATCTTGATAGCATAATTTCATCTTCTGAATCTGAAGGATCTCAAAGTGTGGCAAATATGGCTGCCCTAACTGATTTTGTTGTTGACATCATAGATGAATATGGGGAGAAGAGGCTGAGATCATGTGGAATTGGTTCCATCACCTTCATAGCTACTGTGCAGTCTTTACAGAGGATCCCACAGCCCTTGAGCTCTTCAGGACGGTTCGACTTTCATGTTCAACTGCCTGCCCCAGCTGCCTTGGAGCGTGCGGCCATGTTAAGGCATGAAATTCAAAGGCGCTCCCTGCAATGTTCTGATGATAGTTTGCATAACGTGGCTTCAAAATGCGATGGTTATGATTCATATGATCTGGAAATATTGGTTGATAGAGCTGTTCATAGTGCTGTTAGACGTTTTCTGCCATTTAATGGTCCTAACGGGCATGAACAACCCACCTTACTTGAGGAAGATTTCTCCAAGGCTATGCATGACTTTCTTCCTGTTGCCATGCGTGACATTACTAAGCCTGCAGTTGATGGTAGCCATTCTGGATGGAATGATGTTGGTGGCCTTGTTGATATTCGAAATGCTATTAAGGAGATGATTGAATTGCCATCTAAGTTCCCAAAAATATTTGCTCAAGCTCCTTTACGGCTCAGATCAAATGTTCTCTTATATGGACCTCCTGGTTGTGGTAAAACTCACATTGTCGGTGCTGCTGCTGCTGCTTGTTCATTAAGATTTATATCTGTGAAAGGACCAGAACTGTTGAATAAATATATCGGCGCATCCGAACAAGCTGTTCGTGACATATTCTCCAAAGCATCTGCTGCAGCACCATGCCTTCTCTTTTTTGATGAATTCGATTCTATTGCCCCAAAGAGGGGTCATGACAACACTGGAGTAACTGATCGTGTAGTAAATCAATTTCTGACCGAGCTAGATGGCGTTGAAGTGTTGAATGGTGTATTTGTATTTGCAGCAACCAGTAGACCAGATATGCTTGATGCTGCACTCTTGAGACCCGGTAGATTAGATCGGCTCCTGTTTTGCGATTTTCCTTCACCTAGTGAGAGACTGGACATCCTTAAAGTTCTTTCTAAAAAGTTACCAATTGCCAACGATGTGGATTTGGATGCAATAGCTCATATGACAGAAGGATTCAGTGGAGCTGACCTCCAAGCTTTACTCTCAGATGCTCAACTTGCAGCAGTTCATGAAGTCCTGGATAATGTAGATGCCTCTGTGTTAAAGAGAACTCCTGTTATTACAGATTCCCTTTTGAAATCTATTGCCTCTAAAGCCAGACCATCCGTTTCAGAAGAGGAGAAACGGAGATTAGACAACATCTATAGCCAATTCCTTGATGTTAAGAGATCTGTTGCTGCACAGTCAAGGGATGCAAAAGGCAAGAGGGCAACTCTGGCATGA 3375 0.4181 MEFLVKLVAGKENCFVSLPLPLIQTLQSTSSGQLPSLLALELRSNNNHWVVAWAGDSSASSAIEVSHQFGECIGLTHNASVKVRAVSNVTHATLVTIEPDTEDDWEVLELNSELAEAAILKQVRILHEAMRFPLWLHGRTVLTFHVVSIYPKKAVVQLMPGTEVAVAPKRRKKNLDSDIDSSLESLGAECNSTKAVLRIQESDRRFISNANAIGVNLGVVLTSVGFVHPETAKSLSLVMLQSFLVVPRFSKESLKVSGSNISKTKSDLVAKVVDDQNLTDKKEYRQAVVHIIISDSVAKGHLMVARSLRLYLRAGLHSWVLLKACDANEKEIPSVSLSPCHFKLMRQENIHNKNDLEVLDNRKIHKKKMHKKTGSELYMDIGDWSHHDDVITILSKTHHHKSDEDAAYQSASGVGIQNLVLAWFSAQLEAISSISGIEVNSLILSRETLFHFEVNCYTENKSHASSNSSLEDRDNMVQILYILTLNEESFYDRTVKAYKVSFGERKKIINDPGDFRLFEKIKCGDPVSFSCNEERVYESHDSLDITSIGWMGPIASDVFNRLSLLLSSSSGFWFHSHNLPFPGHILIYGPSGSGKTSLAKAAAKSLENHGEILAHTIFINCSRFNSEKIPAIREAISSHICEALNHAPSIVIFDDLDSIISSSESEGSQSVANMAALTDFVVDIIDEYGEKRLRSCGIGSITFIATVQSLQRIPQPLSSSGRFDFHVQLPAPAALERAAMLRHEIQRRSLQCSDDSLHNVASKCDGYDSYDLEILVDRAVHSAVRRFLPFNGPNGHEQPTLLEEDFSKAMHDFLPVAMRDITKPAVDGSHSGWNDVGGLVDIRNAIKEMIELPSKFPKIFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKASAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLNGVFVFAATSRPDMLDAALLRPGRLDRLLFCDFPSPSERLDILKVLSKKLPIANDVDLDAIAHMTEGFSGADLQALLSDAQLAAVHEVLDNVDASVLKRTPVITDSLLKSIASKARPSVSEEEKRRLDNIYSQFLDVKRSVAAQSRDAKGKRATLA* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01769 1124 Gene3D - 89 169 - -
Pte13g01769 1124 Gene3D - 832 1094 IPR027417 -
Pte13g01769 1124 CDD RecA-like_PEX1_r2 842 999 - -
Pte13g01769 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 833 1100 IPR027417 -
Pte13g01769 1124 FunFam Nuclear valosin-containing protein-like 829 1008 - -
Pte13g01769 1124 Gene3D - 533 732 IPR027417 -
Pte13g01769 1124 Gene3D - 1002 1081 - -
Pte13g01769 1124 SUPERFAMILY ADC-like 11 87 IPR009010 -
Pte13g01769 1124 Gene3D - 2 87 - -
Pte13g01769 1124 Pfam Peroxisome biogenesis factor 1, N-terminal 95 168 IPR015342 GO:0005524|GO:0005777|GO:0007031
Pte13g01769 1124 ProSitePatterns AAA-protein family signature. 971 989 IPR003960 GO:0005524|GO:0016887
Pte13g01769 1124 Pfam ATPase family associated with various cellular activities (AAA) 871 998 IPR003959 GO:0005524|GO:0016887
Pte13g01769 1124 Pfam ATPase family associated with various cellular activities (AAA) 585 730 IPR003959 GO:0005524|GO:0016887
Pte13g01769 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 573 820 IPR027417 -
Pte13g01769 1124 CDD AAA 579 730 - -
Pte13g01769 1124 FunFam Peroxisome biogenesis factor 1 90 169 - -
Pte13g01769 1124 Pfam AAA+ lid domain 1023 1063 IPR041569 -
Pte13g01769 1124 FunFam PeRoXisome assembly factor 1002 1080 - -
Pte13g01769 1124 SUPERFAMILY Cdc48 domain 2-like 90 168 IPR029067 -
Pte13g01769 1124 Gene3D - 733 820 - -
Pte13g01769 1124 PANTHER AAA-FAMILY ATPASE 270 1098 - -
Pte13g01769 1124 SMART AAA_5 581 733 IPR003593 GO:0016887
Pte13g01769 1124 SMART AAA_5 867 1003 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01769 Pte-Chr13 30395233 30407013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01769 573 788 Calmodulin-binding Proteins AT3G56690 26.339 1.15e-10 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01769 K13338 - gmx:100803882 1363.21