Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01754 ATGGCACTTTCTATGCACACAGATTTATCTTACAAGCAGATGGATAGTAGCAAGTACGTGAGGTATACACCTGAGCAGGTTGAAGTTTTAGAAAGAGTGTATTCGGAATGTCCAAAGCCTAGTTCTTTGAGACGACAACAACTCATCAGAGAATGTCCTATGCTCTCTAACATTGAACCGAAACAGATCAAAGTATGGTTTCAGAACCGCAGATGCCGGGAAAAGCAGAGAAAGGAAGCTTCTCGACTGCAGACAGTGAACAAAAAGTTGAGTGCGATGAACAAACTTCTAATGGAAGAGAATGACCGTTTGCAGAAGCAGGTTTCACAGTTGGTCTATCAAAAAGGATACATGAAACAGCAGATGCACACTGCTACTGTAAGCACTACAGACAATAGCTGTGAGTCTGTGGTCATGAGCGGTCAACACCAACAACAAAACCCAACACCTAAGCATCCTCATAGGGATGCCAATAACCCAGCAGGTCTTCTTGCAATAGCTGAGGAGACTATGGCAGAGTTCCTTGCAAAAGCAACTGGAACTGCTATTGACTGGGTACAGATGATTGGGATGAAGCCTGGTCCGGATTCCATAGGTATCGTTGCTGTTTCCCGCAACTGTAATGGGATAGCAGCTCGAGCCTGCGGCCTCGTGAGTCTAGAGCCCACGAAGGTTGCGGAGTTACTTAAAGATCGTCTATCCTGGTACCGTGACTGTCGATGCCTAGACGTGTTAAGTGCTATTCCTACAATTAATGGAGGCACAGTTGAGCTAATATATATGCAGACATATGCTCCGACAACGCTGGCAGCAGCACGTGACTTTTGGACGCTTAGATTTACCACAAGTTTGGAAGATGGAAGTCTTGTGATATGTGAGAGGTCATTGACTTCTTCAACTGGTGGACCAACAGAACCTCCTACTTCAAATTTTGTGAGAGCACATATACTCCCCAGTGGCTACCTAATTCGCCCTTGTGAGGGTGGTGGCTCCATAATTCACATTGTAGATCATGTTGACTTAGATGCTTGCACTGTCCCTGAGGTACTCAGGCCACTCTACGAGTCATCTAAAGTTCTGGCTCAAAAAACTACGATCGCTGCCTTGCGTCATATAAGACAAATTGCACAAGAAACGAGCGGAGAAATTCAGTGTGGTGGGGGGCGTCAGCCTGCTGTCTTGAGGACATTTAGTCAAAGACTCAGTAGGGGTTTCAATGATGCTATTAATGGGTTCGCCGATGATGGCTGGTCGTTAATGAGTAATGATGGAGTAGAGGATGTGACTGTAGTCATCAACTCATCTCCAAACAAATTTCCTGGATCCTACTACAATACATCAATTTTCCCAAATTTTGGAGGTGGGGTGCTTTGTGCCAAGGCATCAATGCTACTACAGGATGTCCCACCTGCTTTGCTTGTTCGTTTCCTGAGGGAACACCGCTCTGAATGGGCTGATTATGGAGTGGATGCATTCTCGGCAGCAAGTCTTAAGTCTAGCCAATATGGTGTTCCTTGTGCAAGGCCTGGTAGCTTCCCTAGCAGCCACGTTATTTTACCACTTGCACAGACTGTTGAGCATGAGGAGTTTCTGGAGGTGGTTCGGCTTGAGGGTCATGCATTTTCCCCTGAAGACATGGCTTTGGCGCGTGATATGTACTTGCTCCAGTTATGCAGTGGGATCGATGAAAACACGATTGGAGCTTGTGCTCAACTTGTATTTGCACCTATCGATGAATCCTTTGCCGATGATGCTTTTCTTCTTCCTTCTGGTTTCCGTGTCATACCTTTAGATCCAAAAACAGATGGTCCAGCTGCAATTCGCACGTTGGATCTGGCCTCTACACTTGAGGTGGGATCTGGTAGTGGCCATCCTTCTGGTGAAACTGATGTGACTAACTACAACCTTCGGTCAGTGCTGACTATTGCATTTCAATTCACATTTGAGAACCACATGCGTGATAGTGTGGCTGTTATGGCACGCCAATACGTGCGGAGTGTCGTTGGATCCGTCCAGAGGGTTGCAATGGCTATTACTCCCTCCAAACTTGGTCCTAGTTTGGCAACGAAATATTTTCCTGGTTCTCCTGAAGCTGTTACTTTAGCACGATGGATATACCGAAGCTACAGGATGCACACTGGCGCAGAGCTCTTTCAACTTGAGTCTCAAGTTGGTGATGCAATTTTAAAGCAACTTTGGCACCATTCAGATGCAATCATGTGCTGTTCAGTGAAAACAAATGCATCTCCTGTGTTTACCTTTGCAAATCAATCCGGACTAGACATGCTTGAAACTACTCTTGTAGCCCTTCAAGATATCATGCTGGACAAATTCCTAGATGAAGCTGGCAGAAAGATTCTTTGTGCTGAGTTCTCCAAGATAATGCAACAGGGGTTTGCATATCTGCCATCAGGAATATGTGCATCCAGCATGGGCCGACCGGTTTCCTATGAGCAGGCTATTACATGGAAGGTTCTCAACGATGATGATTCTAATCACTGCCTGGCTTTCTTGTTCCTCAATTGGTCATTTGTTTGA 2538 0.4574 MALSMHTDLSYKQMDSSKYVRYTPEQVEVLERVYSECPKPSSLRRQQLIRECPMLSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNKKLSAMNKLLMEENDRLQKQVSQLVYQKGYMKQQMHTATVSTTDNSCESVVMSGQHQQQNPTPKHPHRDANNPAGLLAIAEETMAEFLAKATGTAIDWVQMIGMKPGPDSIGIVAVSRNCNGIAARACGLVSLEPTKVAELLKDRLSWYRDCRCLDVLSAIPTINGGTVELIYMQTYAPTTLAAARDFWTLRFTTSLEDGSLVICERSLTSSTGGPTEPPTSNFVRAHILPSGYLIRPCEGGGSIIHIVDHVDLDACTVPEVLRPLYESSKVLAQKTTIAALRHIRQIAQETSGEIQCGGGRQPAVLRTFSQRLSRGFNDAINGFADDGWSLMSNDGVEDVTVVINSSPNKFPGSYYNTSIFPNFGGGVLCAKASMLLQDVPPALLVRFLREHRSEWADYGVDAFSAASLKSSQYGVPCARPGSFPSSHVILPLAQTVEHEEFLEVVRLEGHAFSPEDMALARDMYLLQLCSGIDENTIGACAQLVFAPIDESFADDAFLLPSGFRVIPLDPKTDGPAAIRTLDLASTLEVGSGSGHPSGETDVTNYNLRSVLTIAFQFTFENHMRDSVAVMARQYVRSVVGSVQRVAMAITPSKLGPSLATKYFPGSPEAVTLARWIYRSYRMHTGAELFQLESQVGDAILKQLWHHSDAIMCCSVKTNASPVFTFANQSGLDMLETTLVALQDIMLDKFLDEAGRKILCAEFSKIMQQGFAYLPSGICASSMGRPVSYEQAITWKVLNDDDSNHCLAFLFLNWSFV* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01754 845 Gene3D - 10 84 - -
Pte13g01754 845 Pfam MEKHLA domain 700 844 IPR013978 -
Pte13g01754 845 SMART HOX_1 15 81 IPR001356 GO:0003677
Pte13g01754 845 SUPERFAMILY Bet v1-like 166 377 - -
Pte13g01754 845 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 845 IPR044830 GO:0003700
Pte13g01754 845 CDD homeodomain 18 78 IPR001356 GO:0003677
Pte13g01754 845 SUPERFAMILY Homeodomain-like 18 80 IPR009057 -
Pte13g01754 845 Coils Coil 87 114 - -
Pte13g01754 845 MobiDBLite consensus disorder prediction 137 153 - -
Pte13g01754 845 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Pte13g01754 845 MobiDBLite consensus disorder prediction 137 159 - -
Pte13g01754 845 CDD bZIP 70 109 - -
Pte13g01754 845 SMART START_1 165 375 IPR002913 GO:0008289
Pte13g01754 845 ProSiteProfiles START domain profile. 156 357 IPR002913 GO:0008289
Pte13g01754 845 SUPERFAMILY Bet v1-like 413 600 - -
Pte13g01754 845 FunFam Homeobox-leucine zipper protein REVOLUTA 18 73 - -
Pte13g01754 845 Gene3D - 201 382 IPR023393 -
Pte13g01754 845 Pfam START domain 166 373 IPR002913 GO:0008289
Pte13g01754 845 Pfam Homeodomain 18 76 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01754 Pte-Chr13 30284231 30290893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01754 5 846 Homeobox Transcription Factor Family AT2G34710 76.950 0.0 1351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte13g01754 START 1.1e-49 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01754 K09338 - jre:108996578 1473.37