LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte13g01724	ATGGCGACGACAGTATCATCAGCCTCTGCCTCAGCTTGGTCGAAGCCAGGCGCATGGGCTCTTGCAGCTGAAGAACAAGAAGAAGAATTGCTTCGGAAGGAAGAGAAAGACAACTCCGATTCATCTGCTCAGCCACTTACCGACTTTCCTTCACTTGCAACGGCTGCCGCCACTAAACCCAAGAAGAAGAAGGGCCAGACAGTTTCCCTTGCTGAGTTCAACACCTATGGTGTTTCCAAGCCTACTCAAGTTGAGACCTTGACACCTGAAGAACTGATGGCGTTACCCACCGCTCCGAGGCAGCGAACCGCTGAAGAACTTGAGAGAGAGCGCGGTCTCGGCGGTGGGTTTAAATCCTATGGGCGTAACAGGTATTCTAATAGTGAGGATTCATCCAATTCGAGGTGGGGTTCGTCTAGGGTTTCTGATGATGGGCCACGTAGGAACGGGTTGTTCGAAAGGGATTCAAATAAGGAATCGGCGCCTTCTCGTGCTGATGAGATTGATAATTGGGCTGCTGCAAAGAAGTCGACGGTTGGGAGTGGGTTTGACAGGAGGGAAGACAGAAGAGAAAGAGGTGGTTTCGATTCACAGTCTAAAGCTGATGAATCTGACAGTTGGGTTTCTAACAAGAGTTTTGTCCCATTAGAGGGTCGGAGATTTGGTTCTAGCGGTGGTGGATTTGAGAGAGAGAGGAAAGTAGGGTTCGGATCCAGTGGTGGGGCGGATTCAGATAATTGGGGAAAGAAGAAGGCGGAAGTGAATGGTGGAAGTGAGAGCGTGATTGGGTATGGTAATGGGAGTGTAGGTGGGAGGCCGAGGCTTGTTCTGCAACCAAGAACTCGTCCTTTGAGCGATGGGAGCCAGGAAGGATCTGTGAATGGTGGGGTGAAGCCCAAGGGTTCTAATCCTTTTGGTGAGGCAAGGCCTAGGGAGGACGTTTTGGCTGAGAAGGGTCAGGACTGGAAGAAGATTGATGAGCAGCTTGAGACAATGAAGATTAAGGAGCCAATTGAGAAGGATAATGGTTTCGGGAGAAGTTTTGGTTCCATTAATCGAGGAGCTAGTTTGCCTGAAGATAAAACTGAGAGGGCTTGGAGAAAGAATGAATCAGTTGATAGCACTTCCAAAAGGTATATTGAACAGTTCCTTCCTTCCTGTTCAATATCTTAG	1173	0.491	MATTVSSASASAWSKPGAWALAAEEQEEELLRKEEKDNSDSSAQPLTDFPSLATAAATKPKKKKGQTVSLAEFNTYGVSKPTQVETLTPEELMALPTAPRQRTAEELERERGLGGGFKSYGRNRYSNSEDSSNSRWGSSRVSDDGPRRNGLFERDSNKESAPSRADEIDNWAAAKKSTVGSGFDRREDRRERGGFDSQSKADESDSWVSNKSFVPLEGRRFGSSGGGFERERKVGFGSSGGADSDNWGKKKAEVNGGSESVIGYGNGSVGGRPRLVLQPRTRPLSDGSQEGSVNGGVKPKGSNPFGEARPREDVLAEKGQDWKKIDEQLETMKIKEPIEKDNGFGRSFGSINRGASLPEDKTERAWRKNESVDSTSKRYIEQFLPSCSIS*	391

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	305	319	-	-
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	1	319	-	-
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	180	199	-	-
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	68	86	-	-
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	146	171	-	-
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	25	41	-	-
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	357	373	-	-
	Pte13g01724	390	Pfam	Plant specific eukaryotic initiation factor 4B	11	338	IPR010433	GO:0003743
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	282	296	-	-
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	335	373	-	-
	Pte13g01724	390	MobiDBLite	consensus disorder prediction	121	140	-	-
	Pte13g01724	390	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B	11	358	IPR010433	GO:0003743

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte13g01724	5	381	Eukaryotic Initiation Factors Gene Family	AT4G38710	52.404	6.59e-75	238

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte13g01724	-		-	qsa:O6P43_011491	436.032