Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01722 ATGGCCGCTAACCCTAAGGTTTACTTCGACATGGCTGTCGGCGGTCAACCTGTCGGCCGCATCGTCATGGAGCTTTTCGCTGATACCACTCCAAGGACCGCTGAGAACTTCCGTGCTCTGTGCACGGGCGAGAAAGGAGTCGGTAGAAGTGGGAAGCCACTCCACTTCAAAGGCTCGAAATTTCATCGCGTGATCCCTGATTTCATGTGTCAGGGTGGTGATTTCACTAGAGGAAACGGCACTGGCGGCGAGTCAATTTATGGTGAAAAGTTCGCTGATGAGAACTTCGTCAAGAAGCACACTGGGCCCGGTATTCTGTCTATGGCGAATGCTGGTCCCAACACCAATGGATCTCAGTTCTTCATTTGTACGGCCAAAACCGAGTGGCTCGATGGAAAGCACGTGGTGTTCGGTCAGGTTGTTGAGGGCTATGATGTTGTGAAGGAAATCGAGAAGGTCGGTTCCAGGAGTGGATCCACCAAGAAGGAGGTCATCATCGCTGATTCCGGTCAGCTCTCTTAG 522 0.523 MAANPKVYFDMAVGGQPVGRIVMELFADTTPRTAENFRALCTGEKGVGRSGKPLHFKGSKFHRVIPDFMCQGGDFTRGNGTGGESIYGEKFADENFVKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGYDVVKEIEKVGSRSGSTKKEVIIADSGQLS* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01722 173 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 IPR020892 GO:0003755|GO:0006457
Pte13g01722 173 FunFam Peptidyl-prolyl cis-trans isomerase 1 173 - -
Pte13g01722 173 SUPERFAMILY Cyclophilin-like 3 172 IPR029000 -
Pte13g01722 173 Gene3D - 1 173 IPR029000 -
Pte13g01722 173 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 8 171 IPR002130 GO:0000413|GO:0003755
Pte13g01722 173 PIRSF Peptidylpro_ismrse 1 173 IPR024936 GO:0003755
Pte13g01722 173 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 131 IPR002130 GO:0000413|GO:0003755
Pte13g01722 173 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 132 147 IPR002130 GO:0000413|GO:0003755
Pte13g01722 173 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 104 119 IPR002130 GO:0000413|GO:0003755
Pte13g01722 173 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 IPR002130 GO:0000413|GO:0003755
Pte13g01722 173 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Pte13g01722 173 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 6 172 - -
Pte13g01722 173 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 9 168 IPR002130 GO:0000413|GO:0003755
Pte13g01722 173 CDD cyclophilin_ABH_like 5 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01722 Pte-Chr13 29989678 29991285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01722 19 153 U-box Gene Family AT5G67530 47.059 9.35e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01722 K01802 - gmx:100787030 317.39