Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01709 ATGATACTTTCCTCATTGCAACGTTCATATTTCTCTTTTGGACTTCAAAATTGGCATTTGGGTCGAAGCAAGATGCAACCTTCAGCGGAAAGTCAAAAACAAATGCAAAGCACTTTAACACGCATCATGGTCATGGGGTTTGTTGACAAAGGTAGATGCTTGTTTGGTGGGATGGTGATTGTGTGGCTGCTGACTGTGAAGGTGGAAGGGTACCCCGTTGAAGATCTGGTGGTGAAACTACCTGGGCAGCCTAGTGTAGGTTTCAGGCAGTATGCAGGGTATGTTGATGTCGATGCCAATAATGGGAGAAGCTTGTTCTACTACTTTGCTGAGGCAGACACGGATGCTGATAATAAACCCCTTACTCTATGGCTCAATGGAGGTCCAGGTTGTTCCTCTATTGGTGGAGGTGCCTTTACAGAATTGGGTCCCTTTTATCCAGACGGCAATGGTAGAGGTCTTAGAAGAAATTCAATGTCATGGAATAAAGCATCCAACCTCCTCTTTGTTGAGTCTCCTGCTGGCGTTGGATGGTCGTACTCAAATACATCTTCTGATTACAATTGTGGAGATGCCTCCAGTGCTAAGGATCTGCACACCTTCCTAATGAAGTGGTATGAGAAATTTCCAGCCTTTAAATCAAGACCACTGTTTCTTACTGGAGAAAGCTATGCAGGACACTACATACCTCAATTGGCTAACGTGCTGTTGGATCATAATTCTTACTCAACCGGTTTCAAGTTTAATATCAAAGGAGTTGCTATTGGAAATCCACTTCTGCGACTTGATCGGGATGTTCCAGCAACATACGAATTCTTCTGGTCACATGGGATGATTTCTGATGAAATTGGCCTTGCTATTATGAATGACTGTGATTTTGATGATTACACATTTCCAAGTCCACACAATGAATCCAATTCATGCAACAGTGCAATAGCAAAAGCCAACCGCATTGTTGGTGACTACATAAACGCTTATGATGTGATTCTTGATGTTTGTTATCCATCAATAGTAGAACAAGAGCTGAGACTGAAGAAGATGGCCACTAAAATAAGCCTTGGTGTTGATGTATGCATGAGCTTTGAGAGACGATTCTATTTCAACCTTCCTGAGGTTCAGAAGGCTCTTCATGCAAATCGTACCAATTTACCGTATAGCTGGTCCATGTGCAGTGGGATTCTAAATTATAATGAGACTGATGGCAATGCTGACATGCTTCCATTACTAAAAAGGATCGTTCAGAACCACATTCCAGTTTGGATTTTCAGTGGAGATCAAGACTCTGTTGTGCCGTTTCTGGGGTCGCGGACACTCATTCGTGAACTTGCTCATGATCTGAATTTCAAAATTACAGTTCCTTATAGTGCTTGGTTCCATAAAGGACAGGTGGGTGGTTGGTACACCGAGTATGGGAATTTGTTGAACTTTGCCACTGTAAGGGGGGCAGCTCACATGGTGCCATTTGCGCAGCCATCAAGGGCATTGCATCTTTTCAGTTCATTCATTCGAGGCCATCGTTTGCCAAATTCAACGCGAATTCCAATTGGTTTTTAG 1554 0.4305 MILSSLQRSYFSFGLQNWHLGRSKMQPSAESQKQMQSTLTRIMVMGFVDKGRCLFGGMVIVWLLTVKVEGYPVEDLVVKLPGQPSVGFRQYAGYVDVDANNGRSLFYYFAEADTDADNKPLTLWLNGGPGCSSIGGGAFTELGPFYPDGNGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNTSSDYNCGDASSAKDLHTFLMKWYEKFPAFKSRPLFLTGESYAGHYIPQLANVLLDHNSYSTGFKFNIKGVAIGNPLLRLDRDVPATYEFFWSHGMISDEIGLAIMNDCDFDDYTFPSPHNESNSCNSAIAKANRIVGDYINAYDVILDVCYPSIVEQELRLKKMATKISLGVDVCMSFERRFYFNLPEVQKALHANRTNLPYSWSMCSGILNYNETDGNADMLPLLKRIVQNHIPVWIFSGDQDSVVPFLGSRTLIRELAHDLNFKITVPYSAWFHKGQVGGWYTEYGNLLNFATVRGAAHMVPFAQPSRALHLFSSFIRGHRLPNSTRIPIGF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01709 517 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 77 491 IPR001563 GO:0004185|GO:0006508
Pte13g01709 517 Gene3D - 405 504 - -
Pte13g01709 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Pte13g01709 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Pte13g01709 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Pte13g01709 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Pte13g01709 517 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
Pte13g01709 517 FunFam Carboxypeptidase 71 335 - -
Pte13g01709 517 Gene3D alpha/beta hydrolase 73 334 IPR029058 -
Pte13g01709 517 Gene3D - 358 394 - -
Pte13g01709 517 FunFam Carboxypeptidase 405 504 - -
Pte13g01709 517 SUPERFAMILY alpha/beta-Hydrolases 75 507 IPR029058 -
Pte13g01709 517 Pfam Serine carboxypeptidase 82 504 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01709 Pte-Chr13 29883532 29887710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01709 364 507 Calmodulin-binding Proteins AT2G22960 25.850 4.69e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01709 K16297 - qsa:O6P43_019848 833.558