Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01692 ATGGGTATTTGCTGGAGCGCCCGAATCAAAGCTGAGAGCCAATGTAACACAGGGGTAAATTCACGATATGTAAGCACAGATGGGAATGACTTCAGCGGCTCAAGTAGCACTGTCTCAGCTGTCTCGGTGCCCCAGACAACTCGAAGCGAGGGTGAGATCCTGCAGTCAACAAATTTGAAGGACTTTAGTTTTGGCGAACTCAAGCAGGCCACTAGAAATTTCCGTGCAGATAGTGTTTTGGGAGAAGGTGGTTTTGGTTCAGTATTCAAGGGCTGGATTGATGAGAACTCACTCACAGCCACTAGGCCTGGGACTGGCATTGTCATTGCTGTGAAAAGGCTCAACCAGGATGGTTTCCAGGGTCATAAGGAGTGGTTGGCGGAAGTGAACTATCTTGGGCAGTTTTCTCATCCTCATCTAGTGAAACTTATAGGGTACTGCATTGAAGATGAACACCGTCTATTGGTTTATGAATTTATGCCTCGGGGCAGCTTGGAAAATCATCTATTTAGGAGAGGTTCTTATTTTCAACCTCTTTCTTGGAGCCTCCGGATGAGAGTTGCTCTTGGTGCTGCCAAAGGGCTGGCCTTTCTTCACAATGCTGAGACGAAAGTCATATACAGAGATTTCAAGACTTCTAACATCTTACTGGATTCTAGTTACAATGCAAAGCTTTCTGATTTTGGGCTGGCTAAAGATGGGCCAACTGGCGATAGAAGCCACGTTTCTACCAGGGTCATGGGAACCTATGGATATGCAGCACCAGAGTATTTGGCAACTGGTCATTTAACAGCAAAAAGTGATGTTTATAGTTTTGGGGTTGTCCTTGTGGAAATGTTATCTGGAAGACGAGCGATAGACAAGAATCGACCATCTGGAGAACAAAATCTGGTGGAATGGGCTAAACCCTGCTTGGCTAATAAACGAAAATTATTTCGTATCCTAGATAACCGTCTTGAAGGCCAGTATTCAATGGACATTGCCTTTAAGGCAGCTACCCTTGCGTTAAGATGTCTATCTTTCGAAGCTAAACTCAGGCCAAACATGGAGGAGGTTGTAAGAACATTAGAGCAGCTTCAAGTTTCTGGAGGCACTCTGAACAATCCAAGAAACGGTCACAGAACTCGTAGGCATAGTGCGGATGCTGTCAGGATAGGTTCTGCAGCTTACCCCCGCCCCTCTGCTTCTCCACTTTACGCTTAA 1203 0.4572 MGICWSARIKAESQCNTGVNSRYVSTDGNDFSGSSSTVSAVSVPQTTRSEGEILQSTNLKDFSFGELKQATRNFRADSVLGEGGFGSVFKGWIDENSLTATRPGTGIVIAVKRLNQDGFQGHKEWLAEVNYLGQFSHPHLVKLIGYCIEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRMRVALGAAKGLAFLHNAETKVIYRDFKTSNILLDSSYNAKLSDFGLAKDGPTGDRSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLVEMLSGRRAIDKNRPSGEQNLVEWAKPCLANKRKLFRILDNRLEGQYSMDIAFKAATLALRCLSFEAKLRPNMEEVVRTLEQLQVSGGTLNNPRNGHRTRRHSADAVRIGSAAYPRPSASPLYA* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01692 400 Gene3D Transferase(Phosphotransferase) domain 1 160 375 - -
Pte13g01692 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Pte13g01692 400 ProSiteProfiles Protein kinase domain profile. 74 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01692 400 ProSitePatterns Protein kinases ATP-binding region signature. 80 112 IPR017441 GO:0005524
Pte13g01692 400 FunFam Probable serine/threonine-protein kinase PBL8 160 375 - -
Pte13g01692 400 PANTHER OS01G0588500 PROTEIN-RELATED 42 360 - -
Pte13g01692 400 SUPERFAMILY Protein kinase-like (PK-like) 48 356 IPR011009 -
Pte13g01692 400 MobiDBLite consensus disorder prediction 363 400 - -
Pte13g01692 400 Pfam Protein tyrosine and serine/threonine kinase 77 356 IPR001245 GO:0004672|GO:0006468
Pte13g01692 400 Gene3D Phosphorylase Kinase; domain 1 49 159 - -
Pte13g01692 400 CDD STKc_IRAK 80 359 - -
Pte13g01692 400 FunFam Serine/threonine-protein kinase BIK1 41 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01692 Pte-Chr13 29701877 29705739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01692 50 356 Glycoside Hydrolase AT3G07070 51.948 1.03e-108 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte13g01692 PK_Tyr_Ser-Thr 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01692 - - qsu:111987244 661.759