Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01690 ATGGGAAAGCACTTGCTTAAGAAGCAGCAAGGAGTTCATTTCAACGACAATAGTCTAGGCTGCATGTGGGGTATATTTCATATTCTAGACTACCACCATTGGCGCCATGTTAAGAAAATGTTTCCTCATGGATGGCATCATGACAGAAGACATGCCAGATATGCGAGAAAAAAGATTCTAGGAAACTATATCGATGAAGCACTAGACTCTGGGAATGATGAGTTGGAGCCGCTTCTGGTCAGACAAGTTAAACCAATAGTGAAATCTCCAGACAAGTCTTCCAAAAGACATCAGGATGTGTCTGTTGGAATGCATTTATTTTGTCCAAAACATTTTCTAGAGCATTCAAATTATTGTGTTCGTTGTTCAAGCAACGATCGAAACAACACCAATTCCACAAACAGAAGGCACATCTGTTCTCAATCAAAGACAGAAGAACGGCTAGGCGCCAATCGCAAGCGCAGATATTATTCTAGGAACACCATGAATTTTGATCAGGATCATCAACATGTTTGGAATGCCATACTTCCCGTGGACAAGAATACAAAATTACTAACAGGTTATCAGAAGCTCGTGGAACCAAACAAGCACAATGAAGAAATTTCTAATAAGCTTGAGGAATATAGAGATTTTCTGGAAGTACCAAAGGTTAAGAAGGATATATTCCTCAGGATTCTTCAAGATCTGGATGTAAATAAGAAAACATCCCATCTTCTGCAGGCGTCAAACTCAAATGCCAAGTTGTTGAAATCAGTGTCATATCCAGTGTCCAGATCATCTTGCTCACGCATGAAAGATAAACATGTCAGTATGCTCAAACACAAACACACTGAAATTTGGGTTCTTCCCAAGGGAGAGCAACTGAATATTGCTTCACATGCAGACATTTCCTCCAATGATGCTCAGGATAATGTACAACCTGTGCTCGCAGTAAATGATAACAGTGTTGTTGCTAGTATAAGGGCTAGAAGAATACACAAGTTCTTCTTGGGGACTTCTTTAGGATTAAACCATCAAAACTGGAATCAAATGGTTGTTCATCGTTTTAAAATAGTGAAGCAGAAAATAAAGCATGCACTCATGGAGTTCAAGAAAGATAGAAGACAAAATTCAGCTGAAGAAATTGACCAGAAAATCTTTAACGAATGTAGGCTTAAAAATGCACAAGAGGCAGCTGAATCTATAAATGATGGCAACAGCCAAGAATGCAAAGAGTCTGCAGATAATTTTTGCAGTTCCGATGAGATTTGGGATTCTGATCTAAGCAAACAGAAAGCTTCCTCTTTCAGAAGACCTAGCTTTCTGAATGACTCACTGGATAGATATACTGAACTATTTAAGAGAAGTTTTGGAAAAGACAAAAGGTGGCATAACTCAAAGTCAAAAAGCTTAAAACTGATAAATGAAGATAATGATCAGATGAGCAGCTCTGATTCAAAGTCACGCAGAAGAAATATTTCTCTGCCTGACCTTGATCTCTTGTACTTCTTTCTATATGAACCGACTTTTCGTGGCCATGACTCGTCAATGCCAGTGAAGACTTCTCTTGATAATGGTCATGAGCCATTGGTGCCAGCGAGAAATTCTGCAGATTGTCCCACAAATTCAGTAAGGCTATCAGTCAATACCGATGAACCAGTGGATGTGATTGTAGAGACTGGCCATCAGAATGCAGACAGAGAAAGCAGTCAGAGCAACATGAGTTTCCGTTCTTCATATGTTCTAGATATGGTGGAATTAGAATGCAATGAGGGAATTGCAGATGCCTGTGATGATCTGAGGGATGATAAGCATGTGGAAGAAGCAGTGACTGGCAGTCTTCAACAAGCAAATAAGGAAATAGAACGCATTATACCTTGTACAGAACTAATTGAACAAGCACAAAAAGCAGTTGCCTTTGAGAATGAGCATCAAGAGAGCTGCACCATTTACAAGGAAGACAGAGGAAGTATACATTCTTTTGTGGACTTGACATACCAGAGAACCAACCTTGAGGATATTCAAAATGCAAGCAAGTGTCAGGAAGAACATTCTCTGAGTTCTAAATTTGATTTTAAGGATGGCTTCGACTTCAAATGTACTGGGGATGAGCTTTTAGGGACATGGAACATCACAAAGGACCCACTTAATCAGTCACGGCTCAGAGAAGTTCAGGCCCTTTTGGTCAATGAATATGAATTCTTAGGAGACAATATTGGCTACCCACTTCAACCGCTTGTCATCGATTTACTCAACGAGGTCCTCCTTGATATGCAAGAGAGACTGTCCACTCAATTCCCGAGGCCCCTGTCATCCAACTGTAGGGTTCGTCCCATTCCAAAAGGTCACCGTCTTCTTGAGGAAGTTTGGACGAGACTAAACTGGTACCTAAGGTTGAGACCGGAGCAGGACCAATCGCTGGATGATGTTGTAGGACGAGATTTGGCGGAAGATTCATGGATGAAGCTCAAATCGGAAATCGAGTGTGTAACAGTGGAGCTAGAGGACATGATCTTCCAGGAATTATTTGATGAATTCAATTGTGCTCGAGGTTACTGTCTGAAACTCTTCTAA 2553 0.4058 MGKHLLKKQQGVHFNDNSLGCMWGIFHILDYHHWRHVKKMFPHGWHHDRRHARYARKKILGNYIDEALDSGNDELEPLLVRQVKPIVKSPDKSSKRHQDVSVGMHLFCPKHFLEHSNYCVRCSSNDRNNTNSTNRRHICSQSKTEERLGANRKRRYYSRNTMNFDQDHQHVWNAILPVDKNTKLLTGYQKLVEPNKHNEEISNKLEEYRDFLEVPKVKKDIFLRILQDLDVNKKTSHLLQASNSNAKLLKSVSYPVSRSSCSRMKDKHVSMLKHKHTEIWVLPKGEQLNIASHADISSNDAQDNVQPVLAVNDNSVVASIRARRIHKFFLGTSLGLNHQNWNQMVVHRFKIVKQKIKHALMEFKKDRRQNSAEEIDQKIFNECRLKNAQEAAESINDGNSQECKESADNFCSSDEIWDSDLSKQKASSFRRPSFLNDSLDRYTELFKRSFGKDKRWHNSKSKSLKLINEDNDQMSSSDSKSRRRNISLPDLDLLYFFLYEPTFRGHDSSMPVKTSLDNGHEPLVPARNSADCPTNSVRLSVNTDEPVDVIVETGHQNADRESSQSNMSFRSSYVLDMVELECNEGIADACDDLRDDKHVEEAVTGSLQQANKEIERIIPCTELIEQAQKAVAFENEHQESCTIYKEDRGSIHSFVDLTYQRTNLEDIQNASKCQEEHSLSSKFDFKDGFDFKCTGDELLGTWNITKDPLNQSRLREVQALLVNEYEFLGDNIGYPLQPLVIDLLNEVLLDMQERLSTQFPRPLSSNCRVRPIPKGHRLLEEVWTRLNWYLRLRPEQDQSLDDVVGRDLAEDSWMKLKSEIECVTVELEDMIFQELFDEFNCARGYCLKLF* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01690 850 PANTHER PROTEIN TRM32 1 841 IPR044257 -
Pte13g01690 850 Pfam Domain of unknown function (DUF4378) 687 838 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01690 Pte-Chr13 29691375 29696238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01690 210 832 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 25.116 2.36e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01690 - - qsa:O6P43_028234 476.092