Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01689 ATGGGTAACGGTGTTGGAAAATTCTGCGTGTGTTTCATCGGGGACCGAGGCGACCATCGGAAGCATGACCTATCCGTTTTGATATCAGACCCACTTGATGAGGGCATAGGCCATTCTTTCTGCTACGTTAGGCCCGACCCGTGTTCTATTTCTTCTTCTAAAGATTACTTCGAGGAGACCACCACTTTCCGAACTATCTCCGGTGCTTCTGTGAGTGCTAACACTTCCACTCCTCTCTCTACGTCTTTTGTGGATTTGTATTCTTTCAATAGTTTCGACAGACCTGCGGCTTTTGAGAGCTCTACTTCTTTTGCTTCTCTCCCTCTCCAACCAATACCTCGGAATTTGGTGAACTCTGATCTATTCTCAGGAAATCTGATCGGTGTACCAGTTTCAGGGCCACTTGAGAGAGGGTTCTTATCGGGTCCGATTGAGCGTGGATTTATGTCAGGTCCACTAGAGAATGGTGGCTTGTTCTCTGGTCCAATGGAAAAGGGCAGCTCCGACCAGTTTCAGAGAAGCTTCTCTCATGGCGGTTTTGCTTTAAGACCCAGATCGAGAAAAGGGAGGTGGATGAAATTTCTTGAGGAAGTGATATCGAAAACCTTATCTCATGGACACAACGCGATTGTCACTCCCATTAAAAGTATCCCTATGGTGAAAGAACCTGAGTGGATGGTTAGGTTAGAGAAGCACAATGAGAATTTGACTGTGAGCAGTGTGAATTTCAGCAGTGAAGGCAGCTTAGAGGATGATGATTCGATGGAAAGTCACAATCTTCAATGGGCTCAAGGAAAAGCAGGTGAAGATCGTGTCCATATTGTTGTTTCAGAGGAGCACGGTTGGGTTTTTGTTGGGATTTACGATGGATTCAACGGTCCTGATGCACCGGATTACCTTCTCTCCAATCTCTACCCTGCTGTGCACAAAGAGCTCAAAGGTTTGTTGTGGGATGACAAGCTTGAGCACTCGTCGGAGGCGGTGACCTATGCCACATCCCTTGTTCCATCTGAAAAATCTAATTTTGAAAAGAACTACGGTGCGCAGGCTTGTCACCATAGTGATATGAGCAATATGGAGGTTGATGATTATTCTCAATGTGGTGTTGTTGAAGAGGTTGATTCAGATTCAAAGAGACAGGGAGGTCACAATTCCAACTATAAGGGAGCAGCAAAAAAATGGGAGGAGAATCATAGGAGGTGGAAGTGTGAATGGGATCGAGAAAGATTAGAACTTGACAGAAGATTGAAGGAACAGCTAAATCGACAAAGATCAGATAGTATCAATGCTATTAATCATTCTGAGGTACTGCAAGCACTTTCTCGTGCGCTGAGGAAAACAGAAGAGTCTTATCTAGACATCGCTGATAAGATGGTCATGGAAAATCCTGAGCTAGCTTTGATGGGTTCTTGTGTGCTTGTAATGTTGATGAAAGGAGATGATGTTTATTTTATGAATGTTGGTGACAGCAGAGCTGTTTTGGCTCAGAAGGTAGAGCCTGATTATTGGTTAGGGAAGATTCGTCAGGATCTGCGGAAAATCAATGAAGAGACAATGAATGATCTTGAATCGTCGTTTTGTCAGAGAACAAACTCGGTACCTAGTCTCAATGCTGTTCAGCTAACCGTGGAACATAGCACTAGCGTGCAGAAGGAAGTTCAAAGAATTAGAAGCGAACACCCCGATGATCCTTGTGCTGTAATGAATGATCGAGTGAAGGGTTCCTTAAAGGTTACACGGGCTTTCGGTGCTGGGTTTCTCAAACAGCCAAAGTGTAACGATGCACTTTTGAAGAGGTTCAGAATAGACTACATCGGCACTTCTCCTTACATCACTTGCTCACCGGATCTTCGCCACCACAAATTGGAATCAAAAGATAAATTTTTGATCTTGTCTTCGGATGGACTTTATCAGTACTTCACTAACAAAGAAGCCGTGGCTGAAGTTGAACTTTTCGTTGCCCTCCAACCTGAGGGAGATCCTGCACAGCATTTGGTTGAGGAACTACTATTCCGAGCTGCCAAAAGAGCTGGACTCGACTTCCATCAGTTGTTAGAAATACCGCAGGGCGATCGTCGGCGCTACCATGATGATGTTTCAATCATTGTCATTTCCTTGGATGGAAGGATATGGAGGTCTACTGTATAA 2148 0.4455 MGNGVGKFCVCFIGDRGDHRKHDLSVLISDPLDEGIGHSFCYVRPDPCSISSSKDYFEETTTFRTISGASVSANTSTPLSTSFVDLYSFNSFDRPAAFESSTSFASLPLQPIPRNLVNSDLFSGNLIGVPVSGPLERGFLSGPIERGFMSGPLENGGLFSGPMEKGSSDQFQRSFSHGGFALRPRSRKGRWMKFLEEVISKTLSHGHNAIVTPIKSIPMVKEPEWMVRLEKHNENLTVSSVNFSSEGSLEDDDSMESHNLQWAQGKAGEDRVHIVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYPAVHKELKGLLWDDKLEHSSEAVTYATSLVPSEKSNFEKNYGAQACHHSDMSNMEVDDYSQCGVVEEVDSDSKRQGGHNSNYKGAAKKWEENHRRWKCEWDRERLELDRRLKEQLNRQRSDSINAINHSEVLQALSRALRKTEESYLDIADKMVMENPELALMGSCVLVMLMKGDDVYFMNVGDSRAVLAQKVEPDYWLGKIRQDLRKINEETMNDLESSFCQRTNSVPSLNAVQLTVEHSTSVQKEVQRIRSEHPDDPCAVMNDRVKGSLKVTRAFGAGFLKQPKCNDALLKRFRIDYIGTSPYITCSPDLRHHKLESKDKFLILSSDGLYQYFTNKEAVAEVELFVALQPEGDPAQHLVEELLFRAAKRAGLDFHQLLEIPQGDRRRYHDDVSIIVISLDGRIWRSTV* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01689 715 SMART PP2C_4 253 704 IPR001932 -
Pte13g01689 715 Gene3D - 217 712 IPR036457 -
Pte13g01689 715 Pfam Protein phosphatase 2C 422 655 IPR001932 -
Pte13g01689 715 ProSiteProfiles PPM-type phosphatase domain profile. 253 706 IPR001932 -
Pte13g01689 715 FunFam probable protein phosphatase 2C 4 227 711 - -
Pte13g01689 715 CDD PP2Cc 412 706 IPR001932 -
Pte13g01689 715 PANTHER PROTEIN PHOSPHATASE 2C 249 704 IPR015655 GO:0004722|GO:0006470
Pte13g01689 715 SUPERFAMILY PP2C-like 266 708 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01689 Pte-Chr13 29684720 29687589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01689 1 716 PP2C-type Phosphatase Gene Family AT1G07630 64.698 0.0 889
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01689 - - qsa:O6P43_000210 1072.38