Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01678 ATGGGAGATTGGAAACAAAAGAATCTTCTAAATCATGAGCTGACTCGAGGGATGGAGCTAGCAAGAGAGCTGCAGATACAACTCAACGAGCTTTCTTCATCACATGAGACACGTAAATGGTTGGTTGAAGAGATCCTGGCTACATTTGACAAGACACTTGCAACGGCGAACTGCATTTATTCTTCAATGAGCGAGCCATCATCACAGCTCAAGTCAACTGCAATTCGAATGACAGAATCTCCACCTTTAATCCTAAGTCCCCGGAGTGAGGGCTTTGATAGAGACTTCAAGGACCAAACTCAAAAAGAAGCTAGCAAAAACAGCAAAGAACATTTGCCTATCTGGGTGAAGCAAATTCGAGTTAACCCAGGTATTGGACTGGAAGCGTCTCTTGATGATGGATACAGTTGGAGGAAGTATGGACAGAAAGACATCCTTGGAGCCAAATATCCCAGAGGCTATTACAGATGCAATCGGATAAAACTTCAAGGTTGCTCGGCCACAAAACAAGTCCAGAGGTCTGATGAAGATCCATCCATCTTTCTTATCACTTACCGTGGAAAACACACATGCACTCAGGCCTCCAACACAAACAATCATCGACCTAGCTCAAACCAAGAACTAGCTAGTTCTGTCATTTTTCATCAGCGACAAAATGCCATGCAACAGCAAAAGCAAAAGCAACAATCAACAGAAGAAGTACTGGTCGATCTCCCGGAAGGTCTGAGAATTCAAATAGAGAACCTGGATACCCAGTACCCATCATCTTCCTTCTATTTCCCTTCTGCATCAGACTTGCAACTAGAAAAAACAGTATTCTCACCTTCACTGAATGAAAACAGTTCTGTTCAAAACTTCTCTCCATCTTTCATGTCGCCTACGACATCTGGAGCAAACCCTTTTTCGGTAAGGCCAGATAGCTTTGGGGAAAACTATTCTTTCCCATCTTCAGAGTTGGAGATCCACGGCGTAAGCTCAGCTGCTATATCTGCAGCAAATTCTCCCACAAGAGGCTTAGATCATCCATTTGGACAAGTTGAGTTGGAACCAAACTTCATGTTCAACAATCTAGGTTTCTTTTCGTAA 1086 0.4319 MGDWKQKNLLNHELTRGMELARELQIQLNELSSSHETRKWLVEEILATFDKTLATANCIYSSMSEPSSQLKSTAIRMTESPPLILSPRSEGFDRDFKDQTQKEASKNSKEHLPIWVKQIRVNPGIGLEASLDDGYSWRKYGQKDILGAKYPRGYYRCNRIKLQGCSATKQVQRSDEDPSIFLITYRGKHTCTQASNTNNHRPSSNQELASSVIFHQRQNAMQQQKQKQQSTEEVLVDLPEGLRIQIENLDTQYPSSSFYFPSASDLQLEKTVFSPSLNENSSVQNFSPSFMSPTTSGANPFSVRPDSFGENYSFPSSELEIHGVSSAAISAANSPTRGLDHPFGQVELEPNFMFNNLGFFS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01678 361 FunFam WRKY transcription factor 53 117 194 - -
Pte13g01678 361 MobiDBLite consensus disorder prediction 90 107 - -
Pte13g01678 361 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01678 361 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01678 361 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01678 361 Gene3D WRKY domain 127 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01678 361 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01678 361 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 273 IPR044810 GO:0003700
Pte13g01678 361 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01678 Pte-Chr13 29579681 29581026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01678 2 207 WRKY Transcription Factor Family AT5G24110 42.029 1.12e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte13g01678 WRKY 8.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01678 - - qsu:112011868 338.191