Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01671 ATGCACCAGACCAAGAAGAAGAAGAAGTCCAACCGTCACCGGCAGATGATTTCAGACGATGCAACTACTCTGCGGTTTGATTCCAAGTATTCTGCTCGTCAGAGAAGACTTCGAGTCCGGCGGTTGAAGTATACTTATCAGAGCAGAATCCGTATTGGAGATACCGGTGGTCAGATCATTGTAGCGGATCAGACCGAGAGATCCTCTATAAAAAATAAGAAAAATGGTGAATCCTTGAGTGGTAATGATAAACATGGTGAAATTACTGAGTCGATGAAGGTATCACTGTCACTGACAACGGACGACCAGGAGGATGCTGTATCGGCTGGGTTTGGTGGGGAAGAATGTTTGACTGAGAACAACCTGTCATACGGTATGATGTCTGTCATAGGTGGGAGGAGAGAGATGGAAGATGCGGTGAGTGTGGAGTTAGGGTTCGTGGATAAACATGAAGTGAGGTATGATTTTTTTGCGGTGTATGATGGTCATGGTGGATCTCAGATCGCCAAGGCTTGCAGAGAAAGGTTTCATCGGTTGGTGGCAGAAGAGATGGAGAGGAATCAGATGAAGGAAGCTGGCTGGGAGAGAATGATGGATCAATGTTTTAGTAAAATGGACAAGGAGGTGGCAGATAATGCGGCAGTGAAAACGGTTGGGTCAACGGCGCTAGTGGCGGTAGTGTCATCGTCCGAGGTTGTGGTGGCCCATTGCGGTGACTGTAGAGCTGTAATGGGAAGAGGAGGCGAGGCTTTGGCTTTGTCTAAAGATCATAAGCCAGATAGAGCCGATGAAGCCAGACGAATCGAAGAGGCAGGTGGGAAGGTCATCAATTGGAATGGACATCGTGTTTTAGGCGTTCTTGCCACCTCCAGGTCTATAGGAGACAAGTATCTCAGACCCTATGTGATCTGCGAACCAGAAGTAACAGTGACCAATCGAAATAACCAGGATGAGTTTCTGATACTAGCCAGTGATGGGTTGTGGGATGTGTTGTCAAACGAGAATGCATGTCAAGTTGTGAGGAAATGTCTTGGAAGACAAAAAAGGAGATCGATTATTCCTGAGGTTGGCGACAGAGGTGCTGCTGCAGAGGCAGCAGCTGTGCTCACCCAGCTTGCCATGGCAAAAGGAAGCAAAGACAACACAAGTGTCATTGTGGTCGATCTCAGACAACCTAACAATCACCTGAGGCAGCAATGTTAA 1203 0.4746 MHQTKKKKKSNRHRQMISDDATTLRFDSKYSARQRRLRVRRLKYTYQSRIRIGDTGGQIIVADQTERSSIKNKKNGESLSGNDKHGEITESMKVSLSLTTDDQEDAVSAGFGGEECLTENNLSYGMMSVIGGRREMEDAVSVELGFVDKHEVRYDFFAVYDGHGGSQIAKACRERFHRLVAEEMERNQMKEAGWERMMDQCFSKMDKEVADNAAVKTVGSTALVAVVSSSEVVVAHCGDCRAVMGRGGEALALSKDHKPDRADEARRIEEAGGKVINWNGHRVLGVLATSRSIGDKYLRPYVICEPEVTVTNRNNQDEFLILASDGLWDVLSNENACQVVRKCLGRQKRRSIIPEVGDRGAAAEAAAVLTQLAMAKGSKDNTSVIVVDLRQPNNHLRQQC* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01671 400 MobiDBLite consensus disorder prediction 1 21 - -
Pte13g01671 400 Gene3D - 114 396 IPR036457 -
Pte13g01671 400 Pfam Protein phosphatase 2C 124 382 IPR001932 -
Pte13g01671 400 SMART PP2C_SIG_2 137 389 IPR001932 -
Pte13g01671 400 SMART PP2C_4 113 387 IPR001932 -
Pte13g01671 400 ProSiteProfiles PPM-type phosphatase domain profile. 123 389 IPR001932 -
Pte13g01671 400 CDD PP2Cc 123 389 IPR001932 -
Pte13g01671 400 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Pte13g01671 400 SUPERFAMILY PP2C-like 119 392 IPR036457 -
Pte13g01671 400 FunFam Protein phosphatase 2C 51 116 397 - -
Pte13g01671 400 PANTHER PROTEIN PHOSPHATASE 78 389 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01671 Pte-Chr13 29469472 29472174 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01671 124 391 PP2C-type Phosphatase Gene Family AT2G29380 50.523 5.73e-94 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01671 K14497 - qsa:O6P43_015026 381.719