Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01670 ATGGCAAGAATTGGAAGTAGTACTACTCCATTTCTGTTCTTGACAAGTCTGTTGCTAATCTCTTTGAAGATTGAAGGTAAGCAGAATGAGTGCATGAAATCGAAGTGTGGACATGATGGCCCCATCATTCGATTCCCTTTCCAACTCAAAAATGATGTGCAGCAGCAGGATGGCTGTGCCTATCCTGGGTTTGTCATGTCATGTACAGATAAAGATAAAACAGTCCTTGAGTTGCCTGAATTTCCTGCTTTGCAACTCTTTGTTAGAAGCATAAACTATTCGTCTCATGTCTTAGAACTGTACGATCCGCAATGTCTGTCGGAGAAGCTCTTGAAACTTATCAACTCCAACATCACTCCTTTCCAATTTGGAGTACCAGCAACATTTGCAAGTAGAACTCCTATTTATCGTGACAACATTACTTTGTTTGATTGTTCCTCAACAGGACTGCAATATTTGAAAAATGACTGGTATCTAGATCAAACTAACATCTTTTACAGCGTGGCCCAAGATATATATTCTTGCCCTATCTATGTAGCTTCTGAGGATGATCTCCATAGCGTAATTGATTTAATGTTTTGTACCAAGATGGTTGAGGTTTCGACAATTGCTGTGCAATCCCTTTTCTTCTCGAGGGGCATGGATTCTTTGTTCTTGCATTGGGAAAAGCCAGATTGCAGCAAGTGTGAAATGGAAGGGAAGTATTGCAAATTGAAGAATGATTCTGTCAATAGTGATAAAACAGAATGTTTCCAGTATATTGAGATTTCCACAAGTAAATCTTTGCCGTGGATTATTATAGCTTTGATCACAGGTTTAGTTATTTTTGTGTTGGTGGTAGTTGCACTATATTATCTACAAAATTATTACAAGTTGCGAGCTGAAGATCAAGTGAGGGTTGAAAAGTTTTTGGAGGATTACAGAGCACTTAAGCCTACCAGATTTTCTTATGCAGATGTTAAGAGGATTACTAATCAGTTTGAGGAGAAATTAGGTGAAGGAGCTCATGGAACTGTATTCAAAGGGAAGCTCTCTAGTGACATACAGGTTGCAGTGAAGATCCTTAACAATTCCAAGGGAGATGGGCAAGAATTCATCAATGAAGTTGCTACAATGGGCAGGATTCACCATGTTAATGTGGTTCGATTGGTTGGATACTGTGCTGATGGATACCATCGTGCTCTAGTCTATGATTTTTATCCCAAGGGTTCATTACAAAAATACATAACATCGCCAGATGATAAGAATGTTTTTCTTGGTTGGGAAGTGTTGCAAAGGATTGCTCTTGGAATAGCTAAAGGTATTGAGTATCTTCATCAGGGATGTGATCAAAGAATTCTCCATTTTGATATCAATCCTCATAATGTATTGTTGGATGGCAACTGCATTCCAAAAATTACAGATTTTGGTCTGGCCAAATTGTGCTCTAGAGATAGGAGTACTGTTTCAGTCACTGCTGCTAAAGGAACCTTGGGCTACATTGCACCTGAAGTGTTTTCAAGGAATTTTGGGATTGGGAATATCTCCTACAAGTCTGATGTTTATAGTTATGGAATACTGTTGCTAGAAATGATTGGAGGAAGGAAGAATATGCAGCAGACAGCGGAGGAAGTTTTCCATGTTTTATACCCGGAATGGATCCATAATCTAGTTGATGGAAAAGATATTCATATCCTTATAGAGGATGAGGAGCACACCAAGATTGCCAAGAGACTTGCAATAGTGGGTCTTTGGTGCATTCAGTGGCACCCAATAAATCGCCCTTCCATGAAAGCCGTGGTGCAGATGCTAGAAGGAGAGGGAAACAAGTTAATCATGCCCCCTACTCCTTTGGACAAGGCAAAATCTGCAGGGCCAAGTGCAGGTGTTGTTGAAGGGAGACGCCTCAGCTTGGCGCTGGAAGTGATTCAGGAATCTATGCCAATGTAG 1929 0.4023 MARIGSSTTPFLFLTSLLLISLKIEGKQNECMKSKCGHDGPIIRFPFQLKNDVQQQDGCAYPGFVMSCTDKDKTVLELPEFPALQLFVRSINYSSHVLELYDPQCLSEKLLKLINSNITPFQFGVPATFASRTPIYRDNITLFDCSSTGLQYLKNDWYLDQTNIFYSVAQDIYSCPIYVASEDDLHSVIDLMFCTKMVEVSTIAVQSLFFSRGMDSLFLHWEKPDCSKCEMEGKYCKLKNDSVNSDKTECFQYIEISTSKSLPWIIIALITGLVIFVLVVVALYYLQNYYKLRAEDQVRVEKFLEDYRALKPTRFSYADVKRITNQFEEKLGEGAHGTVFKGKLSSDIQVAVKILNNSKGDGQEFINEVATMGRIHHVNVVRLVGYCADGYHRALVYDFYPKGSLQKYITSPDDKNVFLGWEVLQRIALGIAKGIEYLHQGCDQRILHFDINPHNVLLDGNCIPKITDFGLAKLCSRDRSTVSVTAAKGTLGYIAPEVFSRNFGIGNISYKSDVYSYGILLLEMIGGRKNMQQTAEEVFHVLYPEWIHNLVDGKDIHILIEDEEHTKIAKRLAIVGLWCIQWHPINRPSMKAVVQMLEGEGNKLIMPPTPLDKAKSAGPSAGVVEGRRLSLALEVIQESMPM* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01670 642 ProSiteProfiles Protein kinase domain profile. 325 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01670 642 Pfam Protein kinase domain 327 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01670 642 Pfam Wall-associated receptor kinase galacturonan-binding 31 102 IPR025287 GO:0030247
Pte13g01670 642 FunFam serine/threonine-protein kinase PBS1-like 293 399 - -
Pte13g01670 642 PANTHER RUST RESISTANCE KINASE LR10-RELATED 297 613 IPR045874 GO:0004672
Pte13g01670 642 Gene3D Transferase(Phosphotransferase) domain 1 400 605 - -
Pte13g01670 642 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Pte13g01670 642 Gene3D Phosphorylase Kinase; domain 1 299 399 - -
Pte13g01670 642 FunFam PR5-like receptor kinase 400 608 - -
Pte13g01670 642 SUPERFAMILY Protein kinase-like (PK-like) 308 598 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01670 Pte-Chr13 29452527 29457399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01670 11 611 Receptor kinase-like Gene Family AT1G66910 34.419 4.49e-99 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pte13g01670 Pkinase 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01670 - - qsa:O6P43_019911 650.588