Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01669 ATGAATCGACGGAAAACCTGGCCTACTCCATTGTATTTGCTGATCTTCATAGCAATCCAGCTTTTCCATTTTCGATTACACAAGATTTGCTGTGCCGCTTCATCCAAAAGTGATGACTGTCCTCCTGCTTCCTGTGGCAAAATCTCTGAAATAAAATTTCCCTTCCGACTGAAAAGCGACCCAAAAGGCTGCGGCGATCCCAGGTACGAACTAGCATGTGAGAACACTACCATCAACAATAGTAATGGCACATGCTTTTTATATTTGTTTTCTGGGAAATACGAAGTGGAGGCCATCCATTACGATAACTACACAATCCGACTGGTTGACTCTTCTATTCAGCATCAACACCAAGGTAAAGACTCCAACTGCGCCTCCATTCCTGACTACACATTGTACCAGTACAATTTCAGCTCTGGAATGGGAGATCCTTACAGCCCCTTTCGTTATGAGGGGGTGAGTTATCGGATCACCATTCCTATTATGGTTGTTTTCTGGCATTGTTCCCAACATATCGTTGACAATCCTCAGTTTGTGAACGCCACTCCGTGTTCTGAGTCCAATGAGGGAAATCCCAAAGAGCTTGTTTACGCAACTCCGGGTCTGGGAAGTGGTGACTTCAAAGTTGGTTGCCATGCGAAGCGGGTTACTCTGGCATCGTGGGAATTCATGGATGAATACAACAAGAAGCACCCAGGAGCTAACAAGTCGTACAGCACCATTGGCAACGCATTAGCTTACGGATTTGAGCTATCGTGGTTACATGGCGTATGCAAATACCATTGTCCATCCAGATCATGCTACTTCGACACCGACGACAGTATCAGAGGGTTGCAATGCGGCGAACTGGAGACTTGCCATTACGCTTTCAAGACTACTGATAAATGTGGCTTCATGTCGAGGTTCAGTGGTCTTGCTAAATCCTACCTGTATGGGGTTGTATCGGGACTATACTCAATATTACGTCCCTCCGTGGCTGAGGCAGTTTGGGCAATAGAAGGAGGAATCATAACTGGACGAGTTATCTTGCCATCCTATTTAGGAGCAAGATTTATCTTTGGGGGTCTGTTCTTGATTGCTCTATTGATCTACAGATGGAGAAGGAGGCATTTGTCTGCGTATGAAAATATAGAAAACTTTCTTTCACATAACACCAATCTCATGCCTATAAGGTACTCCTACAAAGAAATCAAAACAATGACCAGAGGCTTTAAGGACAGATTGGGAGAAGGAGGCTTTGGTTGTGTTTATAAAGGGAAGCTACGCAGTGGTCCTTATGTTGCTATAAAGATATTGAACAAGTCCAAAGGCAATGGCCAGGACTTCATTAATGAGGTTGCCACCATTGGAAGGATACACCATGTGAATGTGGTGAGATTGATTGGGTTTTGCGTGGAAGGATCCAAGCGTGCTCTCGTTTATGAGCTCATGCCGAATGGTTCTCTTGATAAACACATTTTTTCAGGGACAACCAGCTTGAGCTGTGATAAAATGTATTTGATATCTGTTGGTGTGGCGAAAGGGATTGACTACCTTCATCAAGGTTGTGACATGCAGATTCTGCATTTTGACATCAAGCCTCACAACATTCTTCTTGACGAGAATTTCATCCCCAAGGTTTCAGACTTTGGACTTGCTAGGCTTTATGCAGTAGATGATAGCATTGTGAATGTGACTGCTAGAGGGACATTGGGATACATGGCTCCTGAGCTGTACTACAAGAATATTGGGGGAGTGTCTTATAAGGCTGATGTCTATAGTTTTGGAATGCTGTTAATGGAGATGGCAAGCAGAAGGAAAAACCTAACAACGCGCACAGGTTATTCAAGTGGAGACAATCTGAGCCAGCTTTACTTTCCCACTTGGATACATGATCAATTCACTGAAGGAAAAGATTTTGAGATGGAAGACATAGTTGATGAGGAAGAAAGGAATATAGCGAGGAAGATGATCATGGTTGCTTTGTGGTGTATACAGATGAATCCTCAAGAGCGTCCTTCGATGAAGAAAGTAGTAGAGATGCTTGAAGCTGGAGATCATCAAAGCATGGCAATGCCTCCGAGGCCTACTCTGTATCCACAAGCAAGACAAGTAGTAGTAATGGATTCCCAAAATGAATCTGCTGACAACTTGGAGGAAGATTATACTTCGTGGGAAACTACAAGCAGTTCCCTGTCAACTCAAACTTGA 2190 0.4374 MNRRKTWPTPLYLLIFIAIQLFHFRLHKICCAASSKSDDCPPASCGKISEIKFPFRLKSDPKGCGDPRYELACENTTINNSNGTCFLYLFSGKYEVEAIHYDNYTIRLVDSSIQHQHQGKDSNCASIPDYTLYQYNFSSGMGDPYSPFRYEGVSYRITIPIMVVFWHCSQHIVDNPQFVNATPCSESNEGNPKELVYATPGLGSGDFKVGCHAKRVTLASWEFMDEYNKKHPGANKSYSTIGNALAYGFELSWLHGVCKYHCPSRSCYFDTDDSIRGLQCGELETCHYAFKTTDKCGFMSRFSGLAKSYLYGVVSGLYSILRPSVAEAVWAIEGGIITGRVILPSYLGARFIFGGLFLIALLIYRWRRRHLSAYENIENFLSHNTNLMPIRYSYKEIKTMTRGFKDRLGEGGFGCVYKGKLRSGPYVAIKILNKSKGNGQDFINEVATIGRIHHVNVVRLIGFCVEGSKRALVYELMPNGSLDKHIFSGTTSLSCDKMYLISVGVAKGIDYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLARLYAVDDSIVNVTARGTLGYMAPELYYKNIGGVSYKADVYSFGMLLMEMASRRKNLTTRTGYSSGDNLSQLYFPTWIHDQFTEGKDFEMEDIVDEEERNIARKMIMVALWCIQMNPQERPSMKKVVEMLEAGDHQSMAMPPRPTLYPQARQVVVMDSQNESADNLEEDYTSWETTSSSLSTQT* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01669 729 MobiDBLite consensus disorder prediction 702 729 - -
Pte13g01669 729 Gene3D Transferase(Phosphotransferase) domain 1 477 686 - -
Pte13g01669 729 PANTHER RUST RESISTANCE KINASE LR10-RELATED 373 700 IPR045874 GO:0004672
Pte13g01669 729 Pfam Wall-associated receptor kinase galacturonan-binding 40 110 IPR025287 GO:0030247
Pte13g01669 729 ProSiteProfiles Protein kinase domain profile. 402 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01669 729 MobiDBLite consensus disorder prediction 714 729 - -
Pte13g01669 729 ProSitePatterns Protein kinases ATP-binding region signature. 408 430 IPR017441 GO:0005524
Pte13g01669 729 FunFam serine/threonine-protein kinase PBS1-like 372 476 - -
Pte13g01669 729 Pfam Protein kinase domain 405 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01669 729 SMART serkin_6 402 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01669 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Pte13g01669 729 Coils Coil 701 721 - -
Pte13g01669 729 Gene3D Phosphorylase Kinase; domain 1 377 476 - -
Pte13g01669 729 FunFam PR5-like receptor kinase 477 687 - -
Pte13g01669 729 SUPERFAMILY Protein kinase-like (PK-like) 380 676 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01669 Pte-Chr13 29452527 29458025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01669 388 709 Receptor kinase-like Gene Family AT5G38280 49.847 1.74e-101 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pte13g01669 Pkinase 5.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01669 - - gmx:100305367 654.44