Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01667 ATGGTCAAGCACAAGGTTTTTCACTTGTTTTGTGTACTGGAAATACTTTTTGTTGTCAAGCATGGCGCAGGCCAAAATGAATGCCAAGAAATTCTAAGCTGTGGACTTCATGGTGTTCCTGTGAAGTTTCCATTCAAACTCAAAGGTAGCAAGCTGCCTGATCACTGCAGCTATCCTGGATTTTTGTTGTCTTGTACGGATGAAAAGCAGACAGTGCTCGAGTTGCCTGATGTTTCAATCTCAGCAAGACTCTCTGTCCAAAGAATAGATTACGAGAACCAAATTCTTCAACTAGGAGACCCCGGGAGTTGCTTGCTTAGACTTATTCCGAAACTCAGTCGCTCATCTATCTCTCCTTTCCAACTCAAATCATCGTTGATCAACAGCACCTTGTTCAATTGCAGTAGCTCTTCGACATATAATAATGGCATCATAAGTGGATTCAATATGGCCATTTGCCCGATTTACCCTGTACACTCTTTTACGGAACTAAGTAGGTTCCCAGCACTAGTGACGTGTACCAAGTGGATAGACATTTACTATTCAGATGACATTATAACTGAAGGTGGTGATTTTCTTCGGTTGCAATGGATGGAACCAGATTGCAGGAGATGCGAATCAAAAGGACAAAAATGTAAACTGAGTGATGGAAATGAAGAAACGACTGAATGCTATCCCAAACTCAAGGGTTCACCAACCATATTAATCGCTTTAAGTGTTGGTTTAGGTTCATCTCTTCTAGTGATCATCATCATTACAATCTGGTATTACAAGTCATACAGAGATTCCAAAGAGTTTCAATTAAGGATAGAAAAGTTTTTGCAAGATTACAGAGCTCTAAAGCCTACCAGATACTCCTATGCTGACATCAAGAGGATCACAAATCAGTTCAAAGATGCGCTAGGCCAAGGAGCATATGGTGTAGTATACAAAGGGAAACTCTCTGATGAAGTCATAGTAGCAGTAAAGGTGCTCAATGATTCCAAGGGAAATGGGGAAGAGTTCATAAATGAAGTAGGAACAATGGGGAAAATCCATCATGTTAATGTGGTTCGATTAGTAGGCTTTTGTGCCGATGGATTCAGACGAGCTTTGGTGTTTGAGTTCTTACCAAATGAATCATTGGAAAAATTCATATGTTCTCCAGACATGAAAAACCACTTCCTTGGATGGGAGAAGCTACATGATATTGCTCTTGGTATAGCTAGAGGTATTGAGTACCTTCACCAGGGCTGTGACCAACAGATTCTGCATTTTGATATCAAACCGCATAATATATTGCTTGATGAGAAGTTCAATCCTAAAATTTCTGATTTTGGTTTGGCCAAACTATGCTCCAAGGATCAAAGCGCTGTGTCCATGACTACAGCTAGAGGCACAATAGGTTACATTGCACCTGAAGTTTTCTCAAGAAACTATGGAAAAGTTTCTTTTAAATCAGATGTTTATAGTTTTGGCATTTTGTTACTTGAAATGGTTGGAGGAAAGAAGAACTTTGATACCACAGTTGAAAATGGCACCCAGATTTACTTTCCTTCTTGGATATATAATCTCTTAGAAGAAGGAGAAGACTTCAGAATATACATCCAAGAAGAAAAAGATGCGCAAATTGCAAAGAGACTAGCAATTGTAGGGCTTGGATGCATTCAGTGGTACCCAATAGACCGACCATCGATGAAAATGGTCATTCAACTGCTGGAAGGAGACGGAGATAAACTGTCCATGCCACCTAATCCGTTCACGTCCACAAATACAAGTTCAGATGCTAGCTTTCCTCTCAGACGTGGGCAAGAGCTTGAGGTCATCCCTGAACAAGAGTGA 1821 0.4036 MVKHKVFHLFCVLEILFVVKHGAGQNECQEILSCGLHGVPVKFPFKLKGSKLPDHCSYPGFLLSCTDEKQTVLELPDVSISARLSVQRIDYENQILQLGDPGSCLLRLIPKLSRSSISPFQLKSSLINSTLFNCSSSSTYNNGIISGFNMAICPIYPVHSFTELSRFPALVTCTKWIDIYYSDDIITEGGDFLRLQWMEPDCRRCESKGQKCKLSDGNEETTECYPKLKGSPTILIALSVGLGSSLLVIIIITIWYYKSYRDSKEFQLRIEKFLQDYRALKPTRYSYADIKRITNQFKDALGQGAYGVVYKGKLSDEVIVAVKVLNDSKGNGEEFINEVGTMGKIHHVNVVRLVGFCADGFRRALVFEFLPNESLEKFICSPDMKNHFLGWEKLHDIALGIARGIEYLHQGCDQQILHFDIKPHNILLDEKFNPKISDFGLAKLCSKDQSAVSMTTARGTIGYIAPEVFSRNYGKVSFKSDVYSFGILLLEMVGGKKNFDTTVENGTQIYFPSWIYNLLEEGEDFRIYIQEEKDAQIAKRLAIVGLGCIQWYPIDRPSMKMVIQLLEGDGDKLSMPPNPFTSTNTSSDASFPLRRGQELEVIPEQE* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01667 606 SMART serkin_6 295 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01667 606 Gene3D Phosphorylase Kinase; domain 1 270 369 - -
Pte13g01667 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 265 584 IPR045874 GO:0004672
Pte13g01667 606 MobiDBLite consensus disorder prediction 576 592 - -
Pte13g01667 606 MobiDBLite consensus disorder prediction 574 594 - -
Pte13g01667 606 SUPERFAMILY Protein kinase-like (PK-like) 278 566 IPR011009 -
Pte13g01667 606 FunFam serine/threonine-protein kinase PBS1-like 265 369 - -
Pte13g01667 606 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Pte13g01667 606 Gene3D Transferase(Phosphotransferase) domain 1 370 575 - -
Pte13g01667 606 ProSiteProfiles Protein kinase domain profile. 295 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01667 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Pte13g01667 606 FunFam PR5-like receptor kinase 370 577 - -
Pte13g01667 606 Pfam Wall-associated receptor kinase galacturonan-binding 28 98 IPR025287 GO:0030247
Pte13g01667 606 Pfam Protein kinase domain 298 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01667 Pte-Chr13 29444932 29447442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01667 6 579 Receptor kinase-like Gene Family AT1G66910 35.312 2.00e-109 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pte13g01667 Pkinase 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01667 - - zju:107414590 672.159