Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g01663 | ATGATTATCAAGCGCAACTTCAAATCCCCAATGCCGAGTCTGAAACGGTGCAAACTTGCTAATTCAGGTGGCGATGAAGACGAAAACTCTGCTGCTCGGAAGAAAAGAAAGACCTATAGCTATTACCATTTGAATCTTCTCAGTGAGGTCGCCGCCGGTATTATTCCTATGAATCTTCACGGTATTTTGAGTCCTGGCGTGGCAGAGAAGACCTTGACTGCATCATGGTGCACACAATTACCTTGCTTCCCTGGAAATGTAGAGTCGAAGTCTGAGACTGCCACGCGGGACTCTGTAAAACCAGAAAAGGTGAACGGAACAGTGGAGGTTTCACGACCACCACTAGTGAGAAGCTCAAGGGGTCGAGTTCAGGTACTTCCTTCGCGATTCAGCGATTCAATTATGGAGGATTGGAGGAAAGACAGCGAGACTAGCTTACGTGATTATAGTTTTGAAAAGGACAATAAAGATTTTAATTTTAAAACAACGACAAGCAGCCAGAATCGTTATTCAAAAGTAGCTGTCAAGAAAGATGACAAAAACGGCTACAAGTGTAGTAAATATGCTACATTGTGCGAAGAAGACGAGGAAGTGGGGAAAATAGTTGCAAGGCGTGTTGGTTTTAAGAACTTCGATAGCATGAGGAAATATTGGAACTCTCGACCAACAACCAATGAGAAATTGGTTGAGGGTGAGGACTGCATCGTGGATAAGGACGACGAAATTGCTTCTGCGGGAATCAATAGAGTCTCGAAGAACAGAAATGAGAAGTGGAGAAAGCAATATTGCCCTGAAGATTTTCATACGGGGGACATAGTGTGGGCAAAACCAGCTAAGAAGGAACCCTTTTGGCCAGCCATCATCATTGATCCAAATTCACAAGCACCAGAGTTGGTTTTGAGGTCCTGTATGGCTAATGCAGCTTGTGTGATGTTCCTTGGATACTCTGGTAATGGAAGTCAGAGGGATTATGCATGGGTGAAGCATGAAATGATTTTTCCATTTTCCGATTACGTTGACAGATTTCAGGATCAGCCTGAGTTGAATGACTGCCAACCTTCTTCTGAATTTCAAATGGCAATGGAGGAGGCATTTTTAGCTGAAGAGGGCTTTAGAGAAAAGTTGATAGAAGATATAAAATTGGCAGCTGCTAATACGTCTTTTGACAAATCCCTTGTGAGAGGTGTTCGAAAGCTCACTGGTGATGCAGATAGTTGGTATAATTACCAGGACTTTCTTTGGAAAGAGAAAGATTGCAAACTCTGTGAAGACTGTGGGGTGAGCCTTCCTCATAAAGTATCAAAGAAAATAAGTGTATCTCCTGGTTGCCAGTTCTTGTGTAGAACATGTTCTCAGTTAACAAAGCTGAAGCATCATTGTGGCATATGCAAGAAATTTTGGAATCATTCAGATAGCGGGAGTTGGGTACGTTGTGATGGATGCAAGGTGTGGGTACATACTGAATGTGATAAAATTTCCAGCAACCTTTTCAAGAAACTGGGAGGCACCGACTATTTCTGCCCCACATGCAAAGCTAAGTTTGATTTTGAATTATCAGATTATGAGAAGTCACAGCCAAAAGTGAAATGCCGCAAAAACAATGGGCAAATGGTGCTCACTAACAAGGTCACCGTTCTCTGCAATGGAGTAGAAGGCATATATTCTCCAAGTCTGCATTCAGTTGTATGCAAGTGTGGTTTCTGTGGAGCGAAGAGACAAGCACTTAGTCAATGGGAAAGACATACAGGTTCCAAATCAAGAAATTGGAGAACTAGTATCAAGGTGAAAGGCTCCATGCTGCCACTGGAACAATGGATGCTTGAGTTGGCAGAATTTCATGCAAACGCTACTGTCTCTGTGAAAACTAAAAGACCAGCTTCAAAAGAAAGAAAGTTGCTCAGTTTTTTACAAGAGGAGTACGAACCTGTTCTTGCAAAGTGGACGACTGAACGTTGTGCAATATGCAGATGGATTCAAGATTGGGATGACAACAAAATTATTATTTGTATCAGATGTCAAATTGCTGTTCATCAAGAATGCTATGGTGCAACAAATGTCCAAGATTTCACTTCATGGGTTTGCAGAGTATGTGAAACACCTGACATCCAACGGGAATGTTGCCTTTGCCCTGTGAAAGGTGGTGCTTTAAAGCCCACTGATGTTGGGACGCTGTGGGTTCATATAACATGTGCTTGGTATCGTCCAGAAGTCACTTTTGCAAGTGACGAAAAAATGGAACCTGTCTTGGGAATCTTGAGTATTCCCTCTAGTTCTTTTGTAAAGATTTGTGTTATCTGTAAGCAAATTCATGGTTCATGTACACAATGTTGCAAGTGTTCAACTTATTACCATGCCATGTGCGCTTCAAGGGCTGGGTACCGCATGGAGCTACATTGCTTAGAGAAAAATGGTAAAAAGATGAAAAGGATGATTTCTTTTTGTGCCTATCACAGGGCTCCAAACCCAGACACTCATCTCATAATACAATCCCCATCTGGAGTCCTTTCAACCAGAAACCGACTGCAAAATAAGAAGAAGGCTGGCTCTAGGCTAATCTCATCTAACCGAGTAACATTAGAAGAGGTTCCTACTGTAGATAATACTGAACTGGAACCATTTTCTGCAGCTAGATGCCGAGTTTTCAAAAGGACCAACACTAGCAAAAAGGGAGCAGCAGATGAAGCTGTTGCGCATAGAGTGAAGGGTCACTGCCAACATCCTTGGGATGCAATAAAAAGATTAAATAATCCCAGAGCTGTGAAGGAGGCTAAAACTTTTTCTTCTTTTAGGGAACGTCTTTACCACTTACAGAAAACAGAACATGAGCTGGTTTGCTTTGGAAGATCTGGCATACATGGATGGGGCCTCTTTGCACGTAGAAATATCAACGAAGGGGAAATGGTGATCGAGTATCGGGGTGAACAAGTGAGGCCTAGTGTTGCAGATATGAGGGAGGCACGTTACAGATTAGAAGGAAAAGACTGCTACCTGTTTAAGATCAGTGAAGAAGTGGTGGTGGATGCTACTGATGCAGGAAACATTGCCCGCCTAATTAATCATTCTTGCATGCCAAACTGCTACGCAAGGATCATGAGTGTGGGTGATGGTGAAAGCAGGATTGTACTCATTGCCAAGACTGATGTGTCTGAGGGTGAGGAGTTAACGTACGATTACTTATTTGATACAAATGAACCTGACGAGCTCAAAGTGCCTTGTCTCTGCAAAGCTCCAACTTGCAGAAAATTCATGAATTAG | 3255 | 0.4258 | MIIKRNFKSPMPSLKRCKLANSGGDEDENSAARKKRKTYSYYHLNLLSEVAAGIIPMNLHGILSPGVAEKTLTASWCTQLPCFPGNVESKSETATRDSVKPEKVNGTVEVSRPPLVRSSRGRVQVLPSRFSDSIMEDWRKDSETSLRDYSFEKDNKDFNFKTTTSSQNRYSKVAVKKDDKNGYKCSKYATLCEEDEEVGKIVARRVGFKNFDSMRKYWNSRPTTNEKLVEGEDCIVDKDDEIASAGINRVSKNRNEKWRKQYCPEDFHTGDIVWAKPAKKEPFWPAIIIDPNSQAPELVLRSCMANAACVMFLGYSGNGSQRDYAWVKHEMIFPFSDYVDRFQDQPELNDCQPSSEFQMAMEEAFLAEEGFREKLIEDIKLAAANTSFDKSLVRGVRKLTGDADSWYNYQDFLWKEKDCKLCEDCGVSLPHKVSKKISVSPGCQFLCRTCSQLTKLKHHCGICKKFWNHSDSGSWVRCDGCKVWVHTECDKISSNLFKKLGGTDYFCPTCKAKFDFELSDYEKSQPKVKCRKNNGQMVLTNKVTVLCNGVEGIYSPSLHSVVCKCGFCGAKRQALSQWERHTGSKSRNWRTSIKVKGSMLPLEQWMLELAEFHANATVSVKTKRPASKERKLLSFLQEEYEPVLAKWTTERCAICRWIQDWDDNKIIICIRCQIAVHQECYGATNVQDFTSWVCRVCETPDIQRECCLCPVKGGALKPTDVGTLWVHITCAWYRPEVTFASDEKMEPVLGILSIPSSSFVKICVICKQIHGSCTQCCKCSTYYHAMCASRAGYRMELHCLEKNGKKMKRMISFCAYHRAPNPDTHLIIQSPSGVLSTRNRLQNKKKAGSRLISSNRVTLEEVPTVDNTELEPFSAARCRVFKRTNTSKKGAADEAVAHRVKGHCQHPWDAIKRLNNPRAVKEAKTFSSFRERLYHLQKTEHELVCFGRSGIHGWGLFARRNINEGEMVIEYRGEQVRPSVADMREARYRLEGKDCYLFKISEEVVVDATDAGNIARLINHSCMPNCYARIMSVGDGESRIVLIAKTDVSEGEELTYDYLFDTNEPDELKVPCLCKAPTCRKFMN* | 1085 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g01663 | 1084 | ProSitePatterns | Zinc finger PHD-type signature. | 652 | 697 | IPR019786 | - | |
Pte13g01663 | 1084 | SUPERFAMILY | SET domain | 931 | 1084 | IPR046341 | - | |
Pte13g01663 | 1084 | Gene3D | SET domain | 835 | 1084 | IPR046341 | - | |
Pte13g01663 | 1084 | ProSiteProfiles | SET domain profile. | 942 | 1059 | IPR001214 | GO:0005515 | |
Pte13g01663 | 1084 | SMART | PHD_3 | 762 | 818 | IPR001965 | - | |
Pte13g01663 | 1084 | SMART | PHD_3 | 651 | 698 | IPR001965 | - | |
Pte13g01663 | 1084 | SMART | PHD_3 | 459 | 511 | IPR001965 | - | |
Pte13g01663 | 1084 | SUPERFAMILY | Tudor/PWWP/MBT | 262 | 375 | - | - | |
Pte13g01663 | 1084 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 454 | 514 | IPR013083 | - | |
Pte13g01663 | 1084 | SUPERFAMILY | FYVE/PHD zinc finger | 459 | 514 | IPR011011 | - | |
Pte13g01663 | 1084 | CDD | PHD_ATX3_4_5_like | 651 | 697 | IPR042011 | - | |
Pte13g01663 | 1084 | CDD | ePHD_ATX3_4_5_like | 706 | 817 | IPR041955 | - | |
Pte13g01663 | 1084 | FunFam | Histone-lysine N-methyltransferase | 701 | 820 | - | - | |
Pte13g01663 | 1084 | CDD | SET_SETD1-like | 929 | 1080 | - | - | |
Pte13g01663 | 1084 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 3 | 1084 | IPR025780 | - | |
Pte13g01663 | 1084 | MobiDBLite | consensus disorder prediction | 88 | 107 | - | - | |
Pte13g01663 | 1084 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 701 | 820 | IPR013083 | - | |
Pte13g01663 | 1084 | SUPERFAMILY | FYVE/PHD zinc finger | 650 | 714 | IPR011011 | - | |
Pte13g01663 | 1084 | FunFam | Histone-lysine N-methyltransferase | 917 | 1084 | - | - | |
Pte13g01663 | 1084 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Pte13g01663 | 1084 | Pfam | PHD-finger | 664 | 698 | - | - | |
Pte13g01663 | 1084 | ProSiteProfiles | Zinc finger PHD-type profile. | 457 | 513 | IPR019787 | - | |
Pte13g01663 | 1084 | Pfam | PHD-finger | 460 | 512 | IPR019787 | - | |
Pte13g01663 | 1084 | ProSiteProfiles | Zinc finger PHD-type profile. | 649 | 700 | IPR019787 | - | |
Pte13g01663 | 1084 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 645 | 700 | IPR013083 | - | |
Pte13g01663 | 1084 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 703 | 818 | IPR034732 | - | |
Pte13g01663 | 1084 | Pfam | PWWP domain | 270 | 365 | IPR000313 | - | |
Pte13g01663 | 1084 | SMART | set_7 | 942 | 1065 | IPR001214 | GO:0005515 | |
Pte13g01663 | 1084 | SMART | PostSET_3 | 1068 | 1084 | IPR003616 | - | |
Pte13g01663 | 1084 | PANTHER | PHD FINGER PROTEINS | 76 | 535 | - | - | |
Pte13g01663 | 1084 | CDD | PWWP_AtATX3-like | 270 | 373 | - | - | |
Pte13g01663 | 1084 | ProSiteProfiles | Post-SET domain profile. | 1068 | 1084 | IPR003616 | - | |
Pte13g01663 | 1084 | Pfam | PHD-zinc-finger like domain | 705 | 817 | - | - | |
Pte13g01663 | 1084 | ProSiteProfiles | PWWP domain profile. | 269 | 338 | IPR000313 | - | |
Pte13g01663 | 1084 | SMART | PWWP_4 | 267 | 336 | IPR000313 | - | |
Pte13g01663 | 1084 | Pfam | SET domain | 953 | 1058 | IPR001214 | GO:0005515 | |
Pte13g01663 | 1084 | Gene3D | - | 263 | 373 | - | - | |
Pte13g01663 | 1084 | CDD | PHD_TCF19_like | 460 | 510 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g01663 | Pte-Chr13 | 29405896 | 29415465 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g01663 | 652 | 817 | C2H2 Transcription Factor Family | AT3G14740 | 34.286 | 4.96e-18 | 85.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Pte13g01663 | zf-HC5HC2H_2 | 2.3e-25 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g01663 | - | - | qsa:O6P43_015012 | 1623.22 |