Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01659 ATGAACTACGGTAGACTAAAATCATCAAACCGCGGTAGCTCCTCCAGAAAGTCCACCCTATCGGATGAATCTCTAGCACCAACGCAAACACCTGATGCCCATGCAACCAACCATAAGAAGAAGTTCATCTTCCTTTCCCTTTTCGTCATTGTGTTGATCACTGCTTCTGCTTGCTCTGCTGTGCTCCTTGTTAGCCGTCGCTCTCGGGGGCATAACGGGTCTGGTATCCGCCAACCCACAGAAGCCATCTCCCGGACCTGCAGTAAGAGCCGATACCCGTCCGTATGTGTGAACTCGCTCCTTGACTTTCCGGGTTCCACCCAAGCTTCCGAGGAAGACCTCATCCACATTTCATTCAACATGACATTGCAGCACCTCAACAAAGCTTTCTACTACTACTCCAGTATCTCCAACATGGAGATGGATCCACGTCTCCGCTCTGCTTACGAAGATTGTCTCGAACTCTTGGACGGTTCAGTCGACGCAATCACGCGCTCACTCACCACCGTGGAGTCCCATTCCGGCGCCAGCACACAGGACGTGCTGACGTGGTTGAGCGCCGCGCTGACAAACCAGGACACGTGTGAGGAGGGATTCTCGGATTTGAGTGGGACCTTGAAGGATCAGATGACAGCTCCCCTGAATGACTTGTCGCAACTCGTGAGCAATTGCTTGGCGATTTATTCCGCTAGTGGGAGTGACGATTTTTCGGGAGTACCGATACAGAATCGGCGTAGACTTATGGAAGAGAGTGGCAATGCCGATTTTTCAGGAGGGCAAATGGGTAAGTTCCCAAAATGGTTGAGTGCGAGAGAGCGGAGGCTTTTGGATTTGCCGCTGTCACAAATTCAGGCAGACATGGTGGTGTCGGCAAATGGAAACGGTACGTATAAGACAATTGCAGAAGCCATAGAAAGCGCGCCACAATTCAGTAGCCGACGAACTATCATCTATGTGAGGGCAGGAAGGTACGAAGAGAAAAATCTGAAAGTGGGAAGGAAGCAATGGAATTTGATGTTTATAGGAGATGGAAAAGGTAAAACTGTAATAACAGGCAAAGAGAGTGTTGGCGATGGCGCCACAACATTCCACAGCGCCTCCTTTGCCGCTACGGGTACTGGCTTTATTGCAAGGGATATCACCTTCGAGAACTACGCGGGGCCAAGCAAACACCAAGCTGTAGCTCTTCGTGTTGGAGCGGACCATGCTGTGGTCTATCGTTGCAGCATCATTGGTTACCAAGACACATGTTACGTTCACTCCAATCGTCAATTCTTTCGTGAATGCGACATATATGGCACAGTGGACTTCATCTTTGGTAATGCAGCCGTCATTTTCCAAAACTGTAACCTAAATGCTCGCAAGCCTATGGACAACCAGAAGAACACCATTACAGCTCAAAACCGAAAAGACCCAAATCAAAACACCGGTATATCCATCCACAACTGTCGGATCCTACCCACTCCTGATCTCCAGGCAGTCAAGGGAACCATCCCAACCTATCTTGGTCGCCCATGGAAGCTTTACTCGAGAACAGTTTACATGTTGTCCTACATGGCTGATCACATACCCCCTCGAGGTTGGCTGGAGTGGAATGGAAACTTTGCCTTAGATACATTGTACTACGGTGAATATATGAATTCTGGGCCGGGTGCAGCAATTGGGCAACGGGTAAAGTGGCCCGGATATCGGATTATCACATCCACAATTGAGGCAAGCAGGTTCACTGTGGCCGAATTCATTTCTGGATCGTCTTGGCTGCCGTCGACTGGGGTGGAATTTATTGGGGGGCTATCAAGCTAA 1803 0.4964 MNYGRLKSSNRGSSSRKSTLSDESLAPTQTPDAHATNHKKKFIFLSLFVIVLITASACSAVLLVSRRSRGHNGSGIRQPTEAISRTCSKSRYPSVCVNSLLDFPGSTQASEEDLIHISFNMTLQHLNKAFYYYSSISNMEMDPRLRSAYEDCLELLDGSVDAITRSLTTVESHSGASTQDVLTWLSAALTNQDTCEEGFSDLSGTLKDQMTAPLNDLSQLVSNCLAIYSASGSDDFSGVPIQNRRRLMEESGNADFSGGQMGKFPKWLSARERRLLDLPLSQIQADMVVSANGNGTYKTIAEAIESAPQFSSRRTIIYVRAGRYEEKNLKVGRKQWNLMFIGDGKGKTVITGKESVGDGATTFHSASFAATGTGFIARDITFENYAGPSKHQAVALRVGADHAVVYRCSIIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVIFQNCNLNARKPMDNQKNTITAQNRKDPNQNTGISIHNCRILPTPDLQAVKGTIPTYLGRPWKLYSRTVYMLSYMADHIPPRGWLEWNGNFALDTLYYGEYMNSGPGAAIGQRVKWPGYRIITSTIEASRFTVAEFISGSSWLPSTGVEFIGGLSS* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01659 600 PANTHER PECTINESTERASE 52 588 - -
Pte13g01659 600 Pfam Pectinesterase 286 583 IPR000070 GO:0030599|GO:0042545
Pte13g01659 600 CDD PMEI-like_3 87 227 - -
Pte13g01659 600 SMART PMEI_2 78 227 IPR006501 GO:0004857
Pte13g01659 600 MobiDBLite consensus disorder prediction 1 32 - -
Pte13g01659 600 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 81 229 IPR035513 -
Pte13g01659 600 Gene3D Invertase/pectin methylesterase inhibitor family protein 80 231 IPR035513 -
Pte13g01659 600 SUPERFAMILY Pectin lyase-like 282 597 IPR011050 -
Pte13g01659 600 FunFam Pectinesterase 79 231 - -
Pte13g01659 600 ProSitePatterns Pectinesterase signature 2. 431 440 IPR033131 -
Pte13g01659 600 NCBIfam pectinesterase inhibitor domain 68 228 IPR006501 GO:0004857
Pte13g01659 600 Pfam Plant invertase/pectin methylesterase inhibitor 82 227 IPR006501 GO:0004857
Pte13g01659 600 Gene3D - 280 598 IPR012334 -
Pte13g01659 600 FunFam Pectinesterase 280 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01659 Pte-Chr13 29362018 29365050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01659 25 599 Carbohydrate Esterase AT3G49220 63.903 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01659 - - qsa:O6P43_015006 879.011