Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01649 ATGGGAAAGAAAGGGAACAATTGGTTTTCGTCGGTGAAGAAAGTTTTCAAGTCATCTTCTAAGGAATTGCCTGAGAAAAAGAAGGGCAATGCAGAGAAATGGAATCATGAAGCCCCAGAAGTGGTTTCATTTGAGCATTTTCCAGCAGCAAGTTCCCCAGACATCACCCATGATGAAAGTACTACTGCATCGACGCCGGTGACTGAGGACAGGAATCATGCTATTGCTATAGCAGCGGCCACTGCTGCTGCAGCAGAAGCTGCTGTTGCAGCAGCTCAAGCAGCTGCTAAAGTTGTCAGGATGGCGGGTTATGGACGCCAGTCTAAGGAAGAAAGAGCAGCCATTCTCATTCAGTCCTACTATAGAGGATATCTGGCTCGGCGTGCACGGCGCGCTTTGAAAGGTCTTGTGAGGTTGCAAGCACTAGTGAGGGGTTACAATGTGCGCAAGCAAGCACAGATGACAATGCGCTGCATGCAAGCACTAGTCCGAGTGCAAGCAAGAGTAAAAGCACGAAGAATCAAATTGACTCATGACAAGTTTCAAAAGAAAATGGAGGAAGAAGCTAAACCTCTGATGAGCACTTTGGAAAGGCATAGAGAAGATAGGAGGTATGGTAGGCGTCTCAGCAGTGAAAGCTATTTGGAAAGTGATTCTCGCAAGCACGATGGTGTGTTGAAGAGGGAGAGAGCTCTTGCATATGCTTTCAACTATCAGCAACAGCAGCAGTCAAACCATGTTCTACAATCAGAGTATGATGGATATGATGTCGCAGCAGTACCTTGTGGAAATGAGCATGGAAAAACTCAATGGGGTTGGAATTGGCTTGAGCGTTGGATGTCATCCCAACCACACCATGTTCATCCCTCTGGGGCACATGACGGCTCTTACATGGCTTTTGCTACCACAACCAGCACCACCACTACCACAGATAACATGTCAGAGAAAACAGTGGACATGGATATTTTGACACCCATGAGGACAAGAAATATAAATATGGGCCTAATGAATGAAGACATGTTCATAAGAAGCCCAAGCCAAGCTCACCAAGTAAAACAGTCAAGCCCAACTAATATGCCAAGCTATATGGCTCCAACCCAATCAGCAAAGGCCAAGGTTAGGGGTCAAGGGACCTTCAAGATGCAGAGCCCAATTGGGCCTCAGTGGAACCCTTCCACAAAGAGAACTACAAGTTCGGCCTGTGACTCTTCAAGCTCTGGTGGAGGAGGAGTAGCAAGTTACCAATTCCCAAGGAGCCCAAGCCCGAAAATAAATAGCAATCGACCCCAATCTCGAAGAATTGCAAGTTGTAGCCCAGATCCCAATGGAGCTGAAGATTGGACATTGCCACTTGGGGGTGTTGGCTGGACATAG 1374 0.4723 MGKKGNNWFSSVKKVFKSSSKELPEKKKGNAEKWNHEAPEVVSFEHFPAASSPDITHDESTTASTPVTEDRNHAIAIAAATAAAAEAAVAAAQAAAKVVRMAGYGRQSKEERAAILIQSYYRGYLARRARRALKGLVRLQALVRGYNVRKQAQMTMRCMQALVRVQARVKARRIKLTHDKFQKKMEEEAKPLMSTLERHREDRRYGRRLSSESYLESDSRKHDGVLKRERALAYAFNYQQQQQSNHVLQSEYDGYDVAAVPCGNEHGKTQWGWNWLERWMSSQPHHVHPSGAHDGSYMAFATTTSTTTTTDNMSEKTVDMDILTPMRTRNINMGLMNEDMFIRSPSQAHQVKQSSPTNMPSYMAPTQSAKAKVRGQGTFKMQSPIGPQWNPSTKRTTSSACDSSSSGGGGVASYQFPRSPSPKINSNRPQSRRIASCSPDPNGAEDWTLPLGGVGWT* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01649 457 Pfam Protein of unknown function (DUF4005) 344 406 IPR025064 -
Pte13g01649 457 MobiDBLite consensus disorder prediction 380 457 - -
Pte13g01649 457 ProSiteProfiles IQ motif profile. 134 161 IPR000048 GO:0005515
Pte13g01649 457 SMART iq_5 109 130 IPR000048 GO:0005515
Pte13g01649 457 SMART iq_5 131 153 IPR000048 GO:0005515
Pte13g01649 457 Gene3D - 107 163 - -
Pte13g01649 457 MobiDBLite consensus disorder prediction 18 37 - -
Pte13g01649 457 Pfam IQ calmodulin-binding motif 137 152 IPR000048 GO:0005515
Pte13g01649 457 Pfam IQ calmodulin-binding motif 111 128 IPR000048 GO:0005515
Pte13g01649 457 MobiDBLite consensus disorder prediction 381 437 - -
Pte13g01649 457 ProSiteProfiles IQ motif profile. 110 138 IPR000048 GO:0005515
Pte13g01649 457 PANTHER IQ-DOMAIN 5-RELATED 1 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01649 Pte-Chr13 29275999 29279261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01649 1 456 IQD Protein Family AT3G49260 49.076 8.87e-110 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01649 - - zju:107414775 462.611