Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01639 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACCAATGGAAAGTTCAAGGCCTGCTGTACTGGAAAGAAAAACAAGACCTCAAAAAGATCAGGCTTTGATCAATTGTCCTAGGTGCAATTCAACTAACACTAAATTCTGCTATTACAACAATTACAGTCTCTCTCAGCCTAGATACTTTTGCAAAACCTGTAGAAGGTATTGGACTGAAGGAGGGTCTTTAAGAAATGTTCCTGTAGGTGGTGGTTCAAGAAAGAATAAGAGAGCATCAGCTTCATCATTATCAGCAAACTCAACAGCTCCATCACTCAAGAAGCTTAGTAGTACTACTGATCAACTCACAGTACCAGTCTTCCCTTCACTGTCTACAACTCAAAGCTCTAAGATCTACAAAAACCATCAGGATCTCAACTTAGCATATCCAGCAGCTGATCTTCAGGATTACCGTACTTTATCTAAATTTGAGGAGGTGCCCTATGCGAGTACTGATCATGAGAAGAGCCGGTCTGAGAACCCTAACTCTTCGTCGGCAACTTCTCATCAGTCTCATTTATCATCTATTGAGCTCCTCAAGACTGGGATTGCTTCGAGGGGCTTAGGTTCTTTCATGGGGTTGCCGGCGTCTGATCAGCCTAGTACAATGTACTCAGATGGATATTCGTTGCAAGACATAAAGCCAAGCCTGAATTTTCCTTTGGAGGGATTTGAAAATGGGTATGTGACTCGTCAAGGGATGCAAGAGGGTACAGGTGCAAGGCTTTTGTTTCCAGTAGAGGAACTGAATAAGCAGGTTCCTGACACAACTGAGCTTGACCAAAGTAGAAGCCAATCAGAGCAAGCAAGTGGCTATTGGAATGGACTGTTAGGAGGAGGGCCATGGTAG 891 0.44 MDTAQWAQGIGVVKPMESSRPAVLERKTRPQKDQALINCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRASASSLSANSTAPSLKKLSSTTDQLTVPVFPSLSTTQSSKIYKNHQDLNLAYPAADLQDYRTLSKFEEVPYASTDHEKSRSENPNSSSATSHQSHLSSIELLKTGIASRGLGSFMGLPASDQPSTMYSDGYSLQDIKPSLNFPLEGFENGYVTRQGMQEGTGARLLFPVEELNKQVPDTTELDQSRSQSEQASGYWNGLLGGGPW* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01639 296 MobiDBLite consensus disorder prediction 267 296 - -
Pte13g01639 296 MobiDBLite consensus disorder prediction 89 110 - -
Pte13g01639 296 MobiDBLite consensus disorder prediction 269 286 - -
Pte13g01639 296 Pfam Dof domain, zinc finger 36 91 IPR003851 GO:0003677|GO:0006355
Pte13g01639 296 MobiDBLite consensus disorder prediction 163 186 - -
Pte13g01639 296 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Pte13g01639 296 MobiDBLite consensus disorder prediction 78 110 - -
Pte13g01639 296 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 180 IPR045174 GO:0003700|GO:0006355
Pte13g01639 296 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01639 Pte-Chr13 29143434 29145348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01639 1 296 C2C2-Dof Transcription Factor Family AT4G24060 38.857 2.68e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pte13g01639 zf-Dof 2.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01639 - - qlo:115960401 332.413