Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01625 ATGGGACATTGCTGCAGCAAAAGCGTTTCCGTTGCAAACAATGAAGCCGTGACCGCCGATCACTCGGTCAAATCGCCGGTTCACCCTGATTTGACTTCGACTGCGACTGGGAACTCGAGACAATACGGCGATGCCACACCAGGTAGGTACACCCCTGCACACTCGTTCACTACCAGTCCTTTCTCGAGTCCTCTTCCGGCAGGGGTGGCGCCATCGCCGGCGAAAACTCCGGGGAGGAAGTTCCGATGGCCTTTGCCGCCTCCTTCACCCGCGAAGCCGATCATGTCGGCTATTCTTAGGCGGCAGGGGAAGGCCAAACCAAAGGAGGGACCGATTCCTGAGGAGCAGGGAGGAGAGAGTGGAGAAGGAGAAAGGTCTCTGAACAAGAGCTTTGGTTATGCGAAGAATTTCGGGGCCAAGTATGAGCTTGGAAAGGAGGTGGGTCGAGGGCATTTCGGTCACACTTGTTGGGCCACGGCAAAGAAGGGAGAGCTTAAAGGGCATACAGTTGCTGTGAAGATCATATCAAAATCTAAGATGACTACAGCCATAGCCATTGAAGATGCCCGAAGGGAAGTGAAAATATTGAAAGCATTATCTGGGCATCCAAATTTAGTCAAGTTTCATGATGCCTTTGAGGATTCCAATAATGTCTACATAGTGATGGAATTGTGTGAGGGTGGAGAGCTATTGGACAGAATTCTGTCAAGAGGTGGAAGATACACTGAAGAAGATGCAAAAACAATTGTTGTGCAAATTTTAAACGTAGTTGCCTTTTGTCATCTTCAAGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTTCTTTTCCTCTCAAAAGATGAGGATTCTCCAATGAAGGTCATTGATTTTGGTCTATCAGATTTTGTTGGGCCAGATCAACGCTTGAATGATATTGTTGGCAGTGCATATTATGTTGCACCTGAAGTATTGCATAGATCTTATAGCATTGAAGCAGATTTATGGAGTATTGGAGTCATTACATACATACTATTGTGTGGAAGCAGACCGTTTTGGGCACGTACTGAATCTGGAATATTCCGTTCAGTTTTAAGAGCTAATCCTAATTTTGATGATACACCCTGGCCGGCTGTATCACAGGAGGCTAAGGACTTTGTCAAGAGGCTTCTGAACAAAGACCATAGAAAAAGAATGACAGCTGCACAAGCCCTAACCCATCCTTGGTTAAGAGACCAAAAGCAGGATGTGCCTTTAGATATTCTGATATACAAATCAGTCAAATCATATGTACGTGCCACACCTTTGAGACGTGCAGCAATAAAGGCTCTTTCAAAAGCTCTGAAAGAAGATCAACTTATTTACCTTAGAGCTCAATTTAGACATTTGGAACCACGAGACGGTCTAATATCCCTTGATAATTTTAAAGCAGCTCTGGGAAGGAATGCAACAGAAGCTATGAGGGAGTCAAGGGTTCATGACATTATAAATTTGATGGAACCTCTCTCTTACAAGAAGATGGATTTCATGGAGTTCTGCGCAGCTGCAATCGTCCCACATCAGCTTGAGGCTCTTGAAAATTGGGAGCAAATTGCAAATATCGCTTTTGAGCATTTCGAACAGTCGGGGAATCGGGTCATTTCAGTTGAAGAGTTGGCACAGGATATGAACCTGGGCCCCACTGCTTACCATTTATTAAGTGATTGGATCAGAAAATCTGATGGAAAGCTAAGCTTCATTGGATACACTAAGTTCTTACATGGTCTGACACTTCGTAGTGCAAACACAAGACACAGACAGCCAGCATGA 1788 0.4497 MGHCCSKSVSVANNEAVTADHSVKSPVHPDLTSTATGNSRQYGDATPGRYTPAHSFTTSPFSSPLPAGVAPSPAKTPGRKFRWPLPPPSPAKPIMSAILRRQGKAKPKEGPIPEEQGGESGEGERSLNKSFGYAKNFGAKYELGKEVGRGHFGHTCWATAKKGELKGHTVAVKIISKSKMTTAIAIEDARREVKILKALSGHPNLVKFHDAFEDSNNVYIVMELCEGGELLDRILSRGGRYTEEDAKTIVVQILNVVAFCHLQGVVHRDLKPENFLFLSKDEDSPMKVIDFGLSDFVGPDQRLNDIVGSAYYVAPEVLHRSYSIEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDTPWPAVSQEAKDFVKRLLNKDHRKRMTAAQALTHPWLRDQKQDVPLDILIYKSVKSYVRATPLRRAAIKALSKALKEDQLIYLRAQFRHLEPRDGLISLDNFKAALGRNATEAMRESRVHDIINLMEPLSYKKMDFMEFCAAAIVPHQLEALENWEQIANIAFEHFEQSGNRVISVEELAQDMNLGPTAYHLLSDWIRKSDGKLSFIGYTKFLHGLTLRSANTRHRQPA* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01625 595 MobiDBLite consensus disorder prediction 20 127 - -
Pte13g01625 595 Pfam Protein kinase domain 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01625 595 FunFam CDPK-related kinase 3 133 305 - -
Pte13g01625 595 SMART serkin_6 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01625 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Pte13g01625 595 Gene3D - 419 572 - -
Pte13g01625 595 CDD STKc_CAMK 140 402 - -
Pte13g01625 595 SUPERFAMILY EF-hand 437 581 IPR011992 -
Pte13g01625 595 Gene3D Transferase(Phosphotransferase) domain 1 230 418 - -
Pte13g01625 595 Gene3D - 442 510 - -
Pte13g01625 595 Gene3D Phosphorylase Kinase; domain 1 134 229 - -
Pte13g01625 595 MobiDBLite consensus disorder prediction 27 65 - -
Pte13g01625 595 ProSiteProfiles Protein kinase domain profile. 141 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01625 595 FunFam CDPK-related kinase 1 134 229 - -
Pte13g01625 595 ProSitePatterns Protein kinases ATP-binding region signature. 147 173 IPR017441 GO:0005524
Pte13g01625 595 PANTHER SERINE/THREONINE-PROTEIN KINASE 125 567 - -
Pte13g01625 595 FunFam CDPK-related kinase 1 439 510 - -
Pte13g01625 595 FunFam Calcium-dependent protein kinase SK5 313 408 - -
Pte13g01625 595 SUPERFAMILY Protein kinase-like (PK-like) 140 426 IPR011009 -
Pte13g01625 595 MobiDBLite consensus disorder prediction 102 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01625 Pte-Chr13 29005676 29011274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01625 51 586 EF-hand Containing Proteins AT3G50530 59.895 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte13g01625 Pkinase 1.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01625 K13412 - qsa:O6P43_014945 970.304