Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01623 ATGGGAAAGAGTGGAAAAAGCTCTTGGTTAACAGCTGTGAGAAGGGCTTTCAGGTCTCCCACCAAAGAGAACGAAAGAGGGAGCAGTAGGAAGAGAGACGACCATACGCAAGAGGAGGAAGATAAGAGGAGAGGAAAACGAAGATGGATTTTTAAGAAGCCGTTCTGTCAAGAAATAGTGATTCAGCAATGCGAACCAAGAACAATATCCACTTCTGCTAATATCGTGGATGCTTATAAGGGTGGGACCAGAACAGTGGACACTGTTATTGAAAGTGTCGATGTAGAGCAAAGGCACGCAATAGCAATAGCCATGGCAACCACAGCTGCTGCTCAGGCAGCAGTAGCAACGGCTCAAGCTGCTGTAGAAGTTGTCCGGCTTGCCAGGCCTTCAATCTACGTTAGACATCACTATGCTGCCGTTCTCATCCAGACTGCCTTCAGAGGATATCTGGCAAGGAGAGCTCTTCTGGCACTTAGGGGAATAGTGAAGCTGCAGGCGCTTGTAAGAGGTTACATTGTCAGAAAAAGAGCGAACATGACTCTTAGGTACATGCAAGCTCTGGTTCGAGTTCAAGCTCGCATGTGCAGTGAACGAGCTACGAGGCTCTTCGATGAAAGGAGCATGGATTCCATCGACTTGGGCGAATCCCAGCTAATAATGGAGAATAGTTTTCAACCTCTGGTTCAAAAACTTGAGGAAGATGCCATAAAACGTGAAAATGCTCTAGCTTATGCTTTCTCTCACAAGATTGGGACAGCTACCTCCAGTGAGGAAGGACATGAGGAGAACCAGTGGATTCGGGCAAGAAAGCAGAGAGAAACTACAGGTAGAGTTTCATGTGATCAAAAGGTGCCTGTAAAAGTTGTTGAAATCGACACCTTTACACCTCGCTCTTACTTGGCTACCGCTGAGATGGAAAGAACAAGTTATCCGCAGCACAATTCTTACCATGGAGCCCGCAAGAGTAAGTTGCACGAGTACTCACCATTGACACCATCCCCAGTCATAGCAAGGCCTCTTCAGGTGCATTCAGCTAGTCCTCGTTGTGCAAGATGGACCCGTTCCGTGCCTCAAATGTCTGGATTAGGAAATAACTCCATCCACGGAGCAAGAACTAGTAGCAGTGATAAGGCTGATATTGTGCCGAACTATATGGCAGCCACAGCATCTGCCAAGGCTCGGATTCGGTCACAAAGCGCACCAAGGCAGAGGAATGCAACCCCAGAAAAGGAGAGAGTTGGATCAGTGAAGAAGCGCCTCTATTTCCCAGTTGATAATCATGGGTTGCTCGCTTAA 1299 0.4758 MGKSGKSSWLTAVRRAFRSPTKENERGSSRKRDDHTQEEEDKRRGKRRWIFKKPFCQEIVIQQCEPRTISTSANIVDAYKGGTRTVDTVIESVDVEQRHAIAIAMATTAAAQAAVATAQAAVEVVRLARPSIYVRHHYAAVLIQTAFRGYLARRALLALRGIVKLQALVRGYIVRKRANMTLRYMQALVRVQARMCSERATRLFDERSMDSIDLGESQLIMENSFQPLVQKLEEDAIKRENALAYAFSHKIGTATSSEEGHEENQWIRARKQRETTGRVSCDQKVPVKVVEIDTFTPRSYLATAEMERTSYPQHNSYHGARKSKLHEYSPLTPSPVIARPLQVHSASPRCARWTRSVPQMSGLGNNSIHGARTSSSDKADIVPNYMAATASAKARIRSQSAPRQRNATPEKERVGSVKKRLYFPVDNHGLLA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01623 432 MobiDBLite consensus disorder prediction 392 415 - -
Pte13g01623 432 ProSiteProfiles IQ motif profile. 160 187 IPR000048 GO:0005515
Pte13g01623 432 MobiDBLite consensus disorder prediction 18 45 - -
Pte13g01623 432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 179 IPR027417 -
Pte13g01623 432 SMART iq_5 158 179 IPR000048 GO:0005515
Pte13g01623 432 SMART iq_5 135 157 IPR000048 GO:0005515
Pte13g01623 432 MobiDBLite consensus disorder prediction 255 277 - -
Pte13g01623 432 Gene3D - 133 202 - -
Pte13g01623 432 MobiDBLite consensus disorder prediction 1 45 - -
Pte13g01623 432 PANTHER IQ-DOMAIN 5-RELATED 1 411 - -
Pte13g01623 432 Pfam IQ calmodulin-binding motif 160 177 IPR000048 GO:0005515
Pte13g01623 432 Pfam IQ calmodulin-binding motif 139 156 IPR000048 GO:0005515
Pte13g01623 432 ProSiteProfiles IQ motif profile. 136 164 IPR000048 GO:0005515
Pte13g01623 432 Pfam Protein of unknown function (DUF4005) 348 428 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01623 Pte-Chr13 28978919 28980563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01623 9 425 IQD Protein Family AT4G00820 38.136 5.09e-70 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01623 - - cave:132174964 385.571