Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01616 ATGGCTTCTCCTCTGTCAACACCTTATCTCGCTTCGTCCCCGCGTTCTTTTTCCCACATGACCTTACACAAACACACGCTAATCCCTTCAATTACGTGTTCACTGTCTTTCCTGTCTGTTTCAAGTCTTCAAAATGGAGCGTATTTCTCTGTACCCACACTCAGTAGATCATCCAGTATCAAACATCAACCGTCATCAGGCGACATGATCTTTCGACCCAATGGATTAGTGTTTATTCAATGCTGGTTCAATCACTCCGAAAGCAATAGTGTAGCGGAAACGGAAATGCTTCCGCCTTTTTTTCGTCAAATGGGTCTTGATGAAGAACAAGTCCATTTGCTTTACATTAATAACCCATCTCTTGTGTCAGCACCCGTGGATAGGGTACGTAAACGGGTTTTTTCTCTACAGTCTTTAGGAATAAATGGGATTGATCTGTGCAACTTGCTCTTAAAGTGCCCATTTTTACTGACTGCAAAAGAGGTTGACCCATTTGTACGTTTTGTGACTGAAGAATTAGAAGGGCAGTTTGATCCATTGCAGTTCAAGCGACTTATGTCTGTAATCCCAACGGTGTTCTTGACGGGTTTTGATGAGAAAGTTGCAGTGCTTCTCAACCATGGAGTTCCACGCGACAAGATTGCCCATGTGCTTAACAAAGTGAGTTTAGCTAAAGCATTTTGTCATAGGTCTGTTCAAGAAATTGATAGAATTGTTACATTCTTGAACCGCTTTGGTGGCATTAGTTTGATAGTGAAGCATCCCACCATTCTAAACTATGATTTGGATACTCAATTGGTTCCAAGGATACGTTATCTAACGAAGCTCAGCGGAGGGGATGAGGCTGCCGCAGGGGTAGTGCTGCGTAAATTGCCTGCATATTTGAAGTACAGTGTTGAACATGTGAAGGGCCATGTTGAATTGCTAAGGTCTTTTGCAGGCCTAAGTAATGAACAAATATTCAGGATATTGCTTGCGTTTCCGAATGTGCTTAGTGCTAGCAGGGACAGGAAATTGCGTCCTAGAATAGAGTTTCTCAAGCAATGTGAATTAAGTTCCAGCGAAATCTTCAAGTTCTTGATTAAAGCTCCCGTGTTCCTAGCCTATTCCTTCGAAGATAACATTGTACATAAGCTTGTGTTGTTGGTTAAGATTGGGTTCAAGAGTAGGACGAAGGATTTGGCAATGGGAATGAGATCTGTGAGTAGGACAAGCTGCAAGAACTTGCAAAAGGTTATTGGCTTGTTCTTGAATTATGGACTTTCATGCGAGGAAATATTATCTATGAGTCAAAAGCATCCTCAAATCCTGCAATATAATCCTAGTTCTTTGGAGGAGAAGATTGAATACTTGATAGAGGTCATGGGTCGTGACATTGAGGATTTGTTTGCCTTTCCTTCGTTTCTTGGTTACAAGCTGAATGACAGAATTAAGGCGAGATATGAAGCAATCAAAAGTACAAGCAGAGAAAAAATGTCAATAAATAAGTTGCTCACAGTTTCCACTGAGGAGTTCATTGGGAAAAAACAGTGTGTAGAAAGCGCTTAA 1548 0.4128 MASPLSTPYLASSPRSFSHMTLHKHTLIPSITCSLSFLSVSSLQNGAYFSVPTLSRSSSIKHQPSSGDMIFRPNGLVFIQCWFNHSESNSVAETEMLPPFFRQMGLDEEQVHLLYINNPSLVSAPVDRVRKRVFSLQSLGINGIDLCNLLLKCPFLLTAKEVDPFVRFVTEELEGQFDPLQFKRLMSVIPTVFLTGFDEKVAVLLNHGVPRDKIAHVLNKVSLAKAFCHRSVQEIDRIVTFLNRFGGISLIVKHPTILNYDLDTQLVPRIRYLTKLSGGDEAAAGVVLRKLPAYLKYSVEHVKGHVELLRSFAGLSNEQIFRILLAFPNVLSASRDRKLRPRIEFLKQCELSSSEIFKFLIKAPVFLAYSFEDNIVHKLVLLVKIGFKSRTKDLAMGMRSVSRTSCKNLQKVIGLFLNYGLSCEEILSMSQKHPQILQYNPSSLEEKIEYLIEVMGRDIEDLFAFPSFLGYKLNDRIKARYEAIKSTSREKMSINKLLTVSTEEFIGKKQCVESA* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01616 515 Pfam mTERF 100 378 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 Pfam mTERF 337 505 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 PANTHER CGI-12 PROTEIN-RELATED 51 226 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 Gene3D Transcription termination factor 3, mitochondrial 305 513 IPR038538 -
Pte13g01616 515 Gene3D Transcription termination factor 3, mitochondrial 94 196 IPR038538 -
Pte13g01616 515 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 SMART mt_12 147 176 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 SMART mt_12 357 388 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 SMART mt_12 459 490 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 SMART mt_12 321 352 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 SMART mt_12 112 142 IPR003690 GO:0003690|GO:0006355
Pte13g01616 515 SMART mt_12 427 458 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte13g01616 mTERF 4.6e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01616 - - zju:107414938 536.184