Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01612 ATGACAATTATTCTAGTTATCTTCATTTATTGTGGATTTGTTCATGATAGGCTCGATAGGGTGAATGTTCCCAAGACAAAGAAGACATACTGCAAAAGCAAAGAATGCAGAAAACACACCTTGCATAAGGTTACGCAATACAAGAAGGGCAAGGATAGTCTTGCTGCTCAAGGCAAAAACCACAAAGAAGATCGTTCTGAGGCTTCAATGCCAGGGATGTAA 222 0.3964 MTIILVIFIYCGFVHDRLDRVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKNHKEDRSEASMPGM* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01612 73 Gene3D - 20 73 - -
Pte13g01612 73 MobiDBLite consensus disorder prediction 50 73 - -
Pte13g01612 73 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 21 67 IPR000552 GO:0003735|GO:0005840|GO:0006412
Pte13g01612 73 SUPERFAMILY Zn-binding ribosomal proteins 21 64 IPR011332 GO:0006412
Pte13g01612 73 Pfam Ribosomal protein L44 38 65 IPR000552 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01612 Pte-Chr13 28892588 28893392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01612 21 73 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 71.698 1.07e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01612 K02929 - csin:114311765 90.5077