Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g01611 | ATGGCAGTGATGTCCCTAAGTTCATTACCCTTGGGGTTCAGATTTCGGCCTACGGACGAGGAGCTCGTTGATTTCTACCTACGCCTCAAGATAAATGGTAACGATGATGCAGTTAAGGTCATCCGTGAAATTGACGTCTGTAAATGGGAGCCTTGGGATTTACCTGATTTATCAGTCATACAGACAAAGGATCGAGAGTGGTTCTTCTTCTGTCCCCAGGACAGGAAGTATCCCAATGGACACCGCTTGAATCGTGCGACAAATCATGGGTATTGGAAGGCTACGGGTAAAGATCGAAGAATTAAGTCGGGTTCAACCTTGATTGGAATGAAGAAGACTCTGGTCTTCTACACTGGACGTGCACCAAAAGGGAAGAGAACTCATTGGGTTCTGCACGAATATCGTCCAACGCTTAAGGAGATGGATGGAACCAATCCTGGACAGAATCCTTTTGTCCTTCTCCGACTGTTCAAGAAGCAAGACGATAGTCTTGACTCTCCAAATTGTGAGGATCCTGAACAGACTGTTTCATCTCCAACCACAAGGTCTTCTCAAGAAGATTTACATTCTGATATGGCTGTTGCAGCAGTATCGCCATCATTGGGAGAAGATGAAAAGAATGTACAAATTGCATTTCGTAAAGATGAAGTTTATGAAGAAACGACATCCAATGATATCACCCATGTTGATCGTCACAGTGATGGATGTGATGTATATAAACAACAAGAACAAATGACTAAAGTTCCAGCTTCGCAGGTAAATCATATGTTAGCGGAGGACTTGAGAATGTTTGATGATCCAATGCCTGAGCCTTTGGATGGAACTATTTTTTCTCCAGTGCATTTTCAGATGAAATCTTGCATGTATTACCCTGCAAATAATTTTTCAGACAGTCACTTTGGCGTTCAACTTCAGTATGGCACAAATGAGGCTGATATTACGGATTTCTTAAATTCAATACTTAATTCTGAGGAATACTCCCGTGAGGAATCCAGTAGTGAGCATCAATTGCGTATTCAAAATGGAAAACCAAACGACTTGGTTTCTGTTAAGGACAATGCATCAGGGAGTGAATCTGATGTTGGTATGACAAACAAACTGTTTCCCTCAGACGTCCAACATCCTTTGTGGCCAGAAAAAGGTGTTGACAGAAAGGTCCCACCACCCATTCTGGAGACAAAACCGGAGCTTATGAGCAATGTTAATGCAAATCATTATCATGAAGAGAATGTACCAAATCTGGGAGTATTTTCAGATGAATTTAAGATTACTAATCCGGTATCTGGAGTTGATCTAGACCCACTCAACAGCTGGGTCAACCATCATGATGAATCATCTAGAAATTTTGCTAGCACGGCTGCGAACAATGGTGATGGTACTGGAATCAGGATAAGATCTAGACAAGTAGAAAACCACAAACCTAGAATTAATCATGTGACACAGGGTTTTGCACCAAGAAGAATACGCCTGCAGCAAAAACCTCAAGCATACCCTGGTCCTTCAGGTGATTCGTCTGCAAACCAAAGCATCAAAGGTGACAACATTGAACCATTTGATAATGAGGAGAGAGAGGTTTCTGAGAGGTTTGTCCCAGACGACGGTGTCAGTGATGCTGAATCTGGGTCTGAACCCCAGAAGAAAACTGAGCAAAACTATATTAGTCTAACTTCTAGCTCAGGTTCAAAAATAATGACTTGCAAGTCAAAGGGTGTTTCAGCTCTTTGCTCCACCTGGTTATACATTGTTGTGTTTGTAGTCATCGCCACCATGTCCATAGTCATTCCTAACATGATGTGA | 1797 | 0.4213 | MAVMSLSSLPLGFRFRPTDEELVDFYLRLKINGNDDAVKVIREIDVCKWEPWDLPDLSVIQTKDREWFFFCPQDRKYPNGHRLNRATNHGYWKATGKDRRIKSGSTLIGMKKTLVFYTGRAPKGKRTHWVLHEYRPTLKEMDGTNPGQNPFVLLRLFKKQDDSLDSPNCEDPEQTVSSPTTRSSQEDLHSDMAVAAVSPSLGEDEKNVQIAFRKDEVYEETTSNDITHVDRHSDGCDVYKQQEQMTKVPASQVNHMLAEDLRMFDDPMPEPLDGTIFSPVHFQMKSCMYYPANNFSDSHFGVQLQYGTNEADITDFLNSILNSEEYSREESSSEHQLRIQNGKPNDLVSVKDNASGSESDVGMTNKLFPSDVQHPLWPEKGVDRKVPPPILETKPELMSNVNANHYHEENVPNLGVFSDEFKITNPVSGVDLDPLNSWVNHHDESSRNFASTAANNGDGTGIRIRSRQVENHKPRINHVTQGFAPRRIRLQQKPQAYPGPSGDSSANQSIKGDNIEPFDNEEREVSERFVPDDGVSDAESGSEPQKKTEQNYISLTSSSGSKIMTCKSKGVSALCSTWLYIVVFVVIATMSIVIPNMM* | 599 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g01611 | 598 | FunFam | Nac domain-containing protein 86 | 18 | 162 | - | - | |
Pte13g01611 | 598 | MobiDBLite | consensus disorder prediction | 497 | 514 | - | - | |
Pte13g01611 | 598 | MobiDBLite | consensus disorder prediction | 163 | 188 | - | - | |
Pte13g01611 | 598 | SUPERFAMILY | NAC domain | 3 | 159 | IPR036093 | GO:0003677|GO:0006355 | |
Pte13g01611 | 598 | MobiDBLite | consensus disorder prediction | 337 | 364 | - | - | |
Pte13g01611 | 598 | Gene3D | NAC domain | 18 | 163 | IPR036093 | GO:0003677|GO:0006355 | |
Pte13g01611 | 598 | MobiDBLite | consensus disorder prediction | 169 | 188 | - | - | |
Pte13g01611 | 598 | PANTHER | PROTEIN CUP-SHAPED COTYLEDON 2-RELATED | 8 | 223 | - | - | |
Pte13g01611 | 598 | Pfam | No apical meristem (NAM) protein | 10 | 135 | IPR003441 | GO:0003677|GO:0006355 | |
Pte13g01611 | 598 | MobiDBLite | consensus disorder prediction | 466 | 552 | - | - | |
Pte13g01611 | 598 | MobiDBLite | consensus disorder prediction | 515 | 544 | - | - | |
Pte13g01611 | 598 | MobiDBLite | consensus disorder prediction | 327 | 364 | - | - | |
Pte13g01611 | 598 | ProSiteProfiles | NAC domain profile. | 9 | 159 | IPR003441 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g01611 | Pte-Chr13 | 28882237 | 28885692 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g01611 | 1 | 491 | NAC Transcription Factor Family | AT4G35580 | 39.530 | 8.53e-99 | 309 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Pte13g01611 | NAM | 2.4e-34 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g01611 | - | - | qsa:O6P43_020031 | 524.242 |