Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01609 ATGCAAACCTCCTGTACCTTGTGGTTCTTAAGCTTAGCTTATCTTTTAGCCTCAACAGGGAACCATTCGATTGTTGTTGATTCAGCTAGTGACAAGAGGATGGATGGACGCCCTATTAATGTAACCAAGCACTTCTCTTTCTCCAACTTCAGCTATGACAGCAACCCCAGAATCTCTCATGAAGTTAAACTACTAGGAAGCGCTAAGCTCTCAAATGAAAAGGCCGCGTTGCAAATTCCAGATTCTCCCCCAGATGTTAATATCCGACACCAAGCAGGTAGAGGCATATATTCCTTCCCGATCCGCCTCTTGGATCCAATCAGTCAAACTCCTGCTTCGTTTGAAACGATATTTTCTTTCCAAGTGAGTAACACCACTACCAATGAGGAAGATGATTATGGTGGCAGTGGTTTCACATTTATCATTGTTCCTGATGAGTTCACCGTGGGAAGGGAAGGGCCATGGCTAGCCATGCTCAATGATGCCTGCGAGGACAAATATAAAGCTGTGGCAATTGAGTTTGACACAAGACAAAACCCAGAGTTCGGTGATCCTAATGACAACCATGTCGGTATCAATCTAGGTAGCATCATATCTAGTACAACCATCAACTTGTCCGATGTTGGTGTTTCTCTCAAGGATGGTTCTGTTCACCGCGCTTGGATTACATACGATGGTCCTCGCAGGTGGATGGATGTCCGTGTGGGATTAGCAAATCAAAATGATTATCCTTCAAAATCCATCTTCTCACAATATTTGGATCTTTCACCACTCCTGAACGAGTACATGTTTGTTGGATTCTCAGCTTCCACAGGTAACCATACACAGATCCACAACATATTGTCTTGGAATTTCACATCCACCAGTCAAGCTTTTCTTCGGCTCCCTTCATCCGAAACTTGTGAGAATAAGTTCATCGTTACAAATAATTCTGAACCTACAATCAATGAAGCTCATGCTAAACCACCAAGCAGCTTTCTGATCTTCTTAGCTGTGGTGATATTGGCTTTGATTGTCCTTTTAAGTTTCTATCTCAATGGTAAGTATAATAAAGAGACTTATAAATCAAACATGGGTATATTGCCATTGGAGAAGCAAAGGCCAAGGCCTCCCAATAAATCCCACCGCTTCTCAGTGACCGAATTAGCCTCTGCAACCAGAGGTTTCAGCGAGTTAGAATTGTTAGGTGGAGATTCCAGAGGTGTATACTATAGAGGGAAGCTTACAAATGGCTGTCAAGTTGCTGTCAAACGGTTTTCAGCACAATTTCTAAGCTCTTATGGATCAGATCGGAGGCGTTTGCTGAAGGAAATCATCGATCTCAGTCGTTTACGCCACCCAAATTTGATATCTATAAGGGGTTGGTGTCAAGACAACCGTGAAGTAATGGTTCTGTATGACTTTTGCCCCAACGGAAGCCTTGACAAATGGTTATTTGGAGCTGGGGTTCTGCCATGGACAAGGAGATATAAGGTTATCAAAGATGTAGCTGAAGCAGTAAGTTTCCTGCACTCCAAGCAACTAGCTCACAAGAACTTGAAATCCAGTAGTGTGTTTCTTGATGTTAGCTTCAGAGCTGCATTAGGTGACTTTGGTTTTGTGCTGTTGGAAACTGAGTCCAGACGGTTTGAGGCAGCAGTGAGCCAAAATGCTGATGTATTTGAATTTGGTGTCTTTGTGTTGGAAGTGATATCTGGAAGGAGGAGACTAGAGAGAGAGGTTGATCAAACAGAAGAGAAGGACTTGTTGGATTTTGCTTGGAGAATGCATGAGAGTGATGAGAAGGTGAAGGTGGTAGATAGCAGAATGGGGGCACTTGTTAATTTGGAGCAAGCAATTAGGGTGCTGGAAATTGGGTTGCTTTGTACAGTCAATGAAAGTAAAGGTAGGCCTTGTATGGAGGAAGTGGTGGAATATTTGAGCATTGAAAAACCAATTCCAGAATTGCCTAGAACTAGACCTATTGCATTGTTCCCCTACAACAGTGCTAATTCTGGGCTCTGCAATAGATATTCTTGTGCTCCTTTTAAGTGA 2034 0.4287 MQTSCTLWFLSLAYLLASTGNHSIVVDSASDKRMDGRPINVTKHFSFSNFSYDSNPRISHEVKLLGSAKLSNEKAALQIPDSPPDVNIRHQAGRGIYSFPIRLLDPISQTPASFETIFSFQVSNTTTNEEDDYGGSGFTFIIVPDEFTVGREGPWLAMLNDACEDKYKAVAIEFDTRQNPEFGDPNDNHVGINLGSIISSTTINLSDVGVSLKDGSVHRAWITYDGPRRWMDVRVGLANQNDYPSKSIFSQYLDLSPLLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRLPSSETCENKFIVTNNSEPTINEAHAKPPSSFLIFLAVVILALIVLLSFYLNGKYNKETYKSNMGILPLEKQRPRPPNKSHRFSVTELASATRGFSELELLGGDSRGVYYRGKLTNGCQVAVKRFSAQFLSSYGSDRRRLLKEIIDLSRLRHPNLISIRGWCQDNREVMVLYDFCPNGSLDKWLFGAGVLPWTRRYKVIKDVAEAVSFLHSKQLAHKNLKSSSVFLDVSFRAALGDFGFVLLETESRRFEAAVSQNADVFEFGVFVLEVISGRRRLEREVDQTEEKDLLDFAWRMHESDEKVKVVDSRMGALVNLEQAIRVLEIGLLCTVNESKGRPCMEEVVEYLSIEKPIPELPRTRPIALFPYNSANSGLCNRYSCAPFK* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01609 677 PANTHER - 79 643 - -
Pte13g01609 677 Pfam Legume lectin domain 44 291 IPR001220 GO:0030246
Pte13g01609 677 Gene3D - 41 292 - -
Pte13g01609 677 Pfam Protein tyrosine and serine/threonine kinase 395 569 IPR001245 GO:0004672|GO:0006468
Pte13g01609 677 CDD lectin_legume_LecRK_Arcelin_ConA 44 288 IPR001220 GO:0030246
Pte13g01609 677 SUPERFAMILY Protein kinase-like (PK-like) 371 641 IPR011009 -
Pte13g01609 677 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 42 295 - -
Pte13g01609 677 Gene3D Transferase(Phosphotransferase) domain 1 469 660 - -
Pte13g01609 677 ProSiteProfiles Protein kinase domain profile. 389 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01609 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 44 289 IPR013320 -
Pte13g01609 677 Gene3D Phosphorylase Kinase; domain 1 359 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01609 Pte-Chr13 28862600 28865275 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01609 37 658 Receptor kinase-like Gene Family AT5G55830 30.746 5.24e-92 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pte13g01609 Lectin_legB 3.6e-54 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01609 - - qsa:O6P43_014898 990.719