Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01602 ATGAAGCTGCACTCTTCAGTTCCTGCTTTTTCTTGCTTAGCACTTACACTCCTCAAGTTTCAGTTGATCTTAGCTGACCTGAACTCTGACAGACAAGCCCTCCTTGCCTTTGCTTCTACTATTCCACACGGCCGAAAACTCAACTGGGATGCTTCTTCTCCAGTCTGCACCTCTTGGTTTGGTGTAACCTGCGATTCCAATGGAACTCATGTCAGCTCCATCCGTCTTCCTGGGGTTGGACTCATAGGCTCCATCCCAGAAAACACTATAGGAAAATTAGATGCCCTAAGGGTCTTGAGCCTCCGTTCCAACTACCTTACTGGAACCCTCCCTGTTGACATTTCCACCATTCCTTCACTCCAGTTTCTTTACCTTCAATACAATAATCTCTCAGGTCCATTTCCTTCTTCTCTCTCACCTAACCTCATTGCGGTAGACCTTTCCTGCAACTCCTTTTCAGGAAATATCCCAACTTCATTACAGTCCCTGAGGCGACTAACGTGGTTGAACCTCCAAAAAAATTCTTTCTCTGGAGCTATCCCTGTCATTGATTTGCCAAGACTCAAGTTTTTGAATCTGAGCAACAACAATCTCAATGGCTCAATTCCTCACGCCCTGCAAAAATACCCCAGTTCTTCTTTCATGGGGAATTCTCTCCTATGTGGCCCTCCACTCAATAACTGCTCTTCAATTTCAATCTCTCCTTCACCATCCCTTTCGCCAACTCATCAGCCACCGTCGCCATTAAACATCCCAGCTCAAAATTCCGCTCCAGCAAAAAAGTTCGGCATAGGTTCTATACTTGCTCTAGCAATTGGAGGCTTTGCATTCATCGGTCTTCTAGTCGTAGTCTTCTCAGTCTGCTGTATGAAGAGAAGAAAAAGTGAAACAGGTGTAGCGGTCAAGGGAAAGGAGTCCAGTCTCTCTTTAAAGACACTGAATCCAAAAGATTTTAGCAGTGCGGTACAAGATGCAGAGAGGAACAAATTGACGTTCTTTGAAGACTGCGCATATAGCTTTAACCTTGAGGATCTGTTAAGGGCATCAGCTGAAGTTTTAGGGAAGGGAAGTTACGGAACAGCGTACAAGGCTGTTTTGGAAGATGGGGCAACTGTTCTGGAACTTGTTGTGAAAAGGCTGAGGGAAGTAGTTGTTAGCAAGAAGGAATTTGAGCAACAAATGGAGATTGTGGGAAGAGTAGGAAATCATCCTCATGTTGTGCCACTTCGTGCTTATTATTATTCTAAGGATGAAAAGCTATTGGTGTACAACTACATGCCAGGGGTCAGAAACAGGGACGCAGGAAGAACCCCACTAGATTGGGAGTCAAGGATGAAGATCATGCTTGGAACTGCCAAAGGAGTTGCTTTTATCCATTCTGAAGGGGGACCAAAATTTACACATGGCAACATAAAGTCTTCCAACGTGCTCATAACTCGGGATCTTGATGGTTGCCTTACTGATGTTGGATTGGCTCCACAGATGAACTTCCCTACAACACGGTCTCGTACCACTGGATACCGTGCTCCAGAAGTAATAGAAGCCAAGAAGATCACTCATAAGTCCGATGTTTACAGCTTCGGAGTACTCCTCCTTGAAATGCTGACAGGTAAAACCCCATTGCAGGATCCAGGTTACGATGACGTAGTCGATCTCCCAAGATGGGTGAGGTCCGTTGTTCGCGAGGAGTGGACTGCTGAAGTTTTTGATATTGAGCTTCTGAGGGGCCGTTATGTTGAGGAGGAAATGGTGCAAATGCTTCAGATTGGGTTGGCATGTGTGGTAAGAGTACCAGACATGCGTCCTACGATGGAGCAAGTTGTTAGAATGATAGAGGAAGTTCGACAACCTGAGTTGAAGAACCGAACATCCTCAGAATCCGAGTCGAATTTGCAGACACCGTGA 1905 0.4556 MKLHSSVPAFSCLALTLLKFQLILADLNSDRQALLAFASTIPHGRKLNWDASSPVCTSWFGVTCDSNGTHVSSIRLPGVGLIGSIPENTIGKLDALRVLSLRSNYLTGTLPVDISTIPSLQFLYLQYNNLSGPFPSSLSPNLIAVDLSCNSFSGNIPTSLQSLRRLTWLNLQKNSFSGAIPVIDLPRLKFLNLSNNNLNGSIPHALQKYPSSSFMGNSLLCGPPLNNCSSISISPSPSLSPTHQPPSPLNIPAQNSAPAKKFGIGSILALAIGGFAFIGLLVVVFSVCCMKRRKSETGVAVKGKESSLSLKTLNPKDFSSAVQDAERNKLTFFEDCAYSFNLEDLLRASAEVLGKGSYGTAYKAVLEDGATVLELVVKRLREVVVSKKEFEQQMEIVGRVGNHPHVVPLRAYYYSKDEKLLVYNYMPGVRNRDAGRTPLDWESRMKIMLGTAKGVAFIHSEGGPKFTHGNIKSSNVLITRDLDGCLTDVGLAPQMNFPTTRSRTTGYRAPEVIEAKKITHKSDVYSFGVLLLEMLTGKTPLQDPGYDDVVDLPRWVRSVVREEWTAEVFDIELLRGRYVEEEMVQMLQIGLACVVRVPDMRPTMEQVVRMIEEVRQPELKNRTSSESESNLQTP* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01602 634 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 426 625 - -
Pte13g01602 634 SUPERFAMILY L domain-like 40 225 - -
Pte13g01602 634 Gene3D Ribonuclease Inhibitor 184 229 IPR032675 -
Pte13g01602 634 FunFam Leucine-rich repeat receptor-like protein kinase 140 228 - -
Pte13g01602 634 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Pte13g01602 634 PANTHER OS05G0588300 PROTEIN 12 626 - -
Pte13g01602 634 Pfam Protein kinase domain 350 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01602 634 Gene3D Transferase(Phosphotransferase) domain 1 426 633 - -
Pte13g01602 634 Gene3D Ribonuclease Inhibitor 27 183 IPR032675 -
Pte13g01602 634 SUPERFAMILY Protein kinase-like (PK-like) 351 618 IPR011009 -
Pte13g01602 634 ProSiteProfiles Protein kinase domain profile. 347 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01602 634 ProSitePatterns Protein kinases ATP-binding region signature. 353 378 IPR017441 GO:0005524
Pte13g01602 634 FunFam Leucine-rich repeat receptor-like protein kinase 29 139 - -
Pte13g01602 634 FunFam pollen receptor-like kinase 1 316 425 - -
Pte13g01602 634 Gene3D Phosphorylase Kinase; domain 1 314 425 - -
Pte13g01602 634 Pfam Leucine rich repeat 78 130 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01602 Pte-Chr13 28667407 28669964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01602 24 615 Receptor kinase-like Gene Family AT5G58300 58.638 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte13g01602 Pkinase 3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01602 - - qsa:O6P43_014864 833.172