Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01601 ATGGTTTCCACTCCATTGTCTCCATTGAAGGAGAAACTTGATGGCAAATACCCTTTTCAGAAACAGTTTCTTTCGCCAACAGCTGAAACTTCGAAAGTTTTGGTGCCTCTTGATTGTGTAGAGTTAGGGTTCTCTGATGTGTTTGGTCCTATTCCAATTCAAACCCAAATAGAACTCACTACTGAGAATACTAACGTTTTAACAGCCACAGAGGATCCAAATCAATTGGTTTTCATTGACAACCATTCTCAGTCACTGGTGGGTCCTTCAGATATTCCTTGCCAGTCATTGTCAGTTGAACATGGAAGTGCAAGGACTTCGGATTCTGTAAATCAACTGGTTGAGGAAATATGTGAGGATAAGGTTGAAGGACTTGAAGGTTATGATGATTCTGAGAGAGTGAAATCCAATGAACACAACAGTGACTTGTTTCCAAAGCGACCGAGACAAGTTGGTATTGAAGATTTTGAATTTCTGAGACTTATTGGTAAAGGTGCCTCTGGAAAAGTGTATCAGGTGAAGAAGAAAGGTACTTCAGAAATATATGCTATGAAAGTGGTGCGCAAGGACAGGATAGTGCGGAAAGATCACGCTAATTATATCATGTCTGAAAGGAACATATTGGCAAAAGTGGATCACCCCTTTGTTGTGCGGCTCAGATATTCATTTCAAAACAAATATAGATTGTACCTTGTGATGGATTTCATAAATGGTGGTCACCTCTTCTTTCAGCTCCGTTTCCAAGGGCTTTTTAGGGAGGATTTGGGACGTTTGTATGCTGCAGAGATTGTTTCTGCCATTTCGCATCTCCACAAAACCGGCATAATGCACAGGGATCTCAAACCTGAAAATGTTCTTCTTGGTGCAGATGGTCATGTAGTGTTGACTGATTTTGGGCTTGCTAAGAATTTTGTTGATACCGAAAGATCATATTCCTTATGTGGAACTCTAGGATATATGTCCCCAGAAGTTTTACAGTCTAAAGGCCATCACAAGTCTACTGATTGGTGGAGTGTAGGGATCTTAATATTCGAAATGCTTACGGGAAGGCCTCCTTTTAGAGGTGGAAATAGACAGAAAATGCAAGAGAAGATCATGAAGGAAAAGATAAACCTTCCACCCTATTTGTCGCAGGAAGCACACTCTCTGCTAAAAGGGCTTTTGCAGAAAGAAGTTGACAAACGCCTTGGCAGTGGACCTGATGGCGGTGAGGAGGTAAAAAGACATGAGTGGTTTAGAACAATTGACTGGAAGAAATTGGAGGCTAGGGAAATAAGGCCAATGTTTGTGCCCAAAGTAAATGGGGCACAATGTGTTGCCAACTTCGATGTCCGGTACACAAGGATGCCTGTGATTGATTCTCCACCTGTTACTCCCAAATACGGTGACGACAACAACAACCCCTTCAAGGGGTTTTCTTTCGTCCAATCTGCAATGTGA 1440 0.4188 MVSTPLSPLKEKLDGKYPFQKQFLSPTAETSKVLVPLDCVELGFSDVFGPIPIQTQIELTTENTNVLTATEDPNQLVFIDNHSQSLVGPSDIPCQSLSVEHGSARTSDSVNQLVEEICEDKVEGLEGYDDSERVKSNEHNSDLFPKRPRQVGIEDFEFLRLIGKGASGKVYQVKKKGTSEIYAMKVVRKDRIVRKDHANYIMSERNILAKVDHPFVVRLRYSFQNKYRLYLVMDFINGGHLFFQLRFQGLFREDLGRLYAAEIVSAISHLHKTGIMHRDLKPENVLLGADGHVVLTDFGLAKNFVDTERSYSLCGTLGYMSPEVLQSKGHHKSTDWWSVGILIFEMLTGRPPFRGGNRQKMQEKIMKEKINLPPYLSQEAHSLLKGLLQKEVDKRLGSGPDGGEEVKRHEWFRTIDWKKLEAREIRPMFVPKVNGAQCVANFDVRYTRMPVIDSPPVTPKYGDDNNNPFKGFSFVQSAM* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01601 479 ProSitePatterns Protein kinases ATP-binding region signature. 162 195 IPR017441 GO:0005524
Pte13g01601 479 PANTHER RIBOSOMAL PROTEIN S6 KINASE 112 477 - -
Pte13g01601 479 SUPERFAMILY Protein kinase-like (PK-like) 153 461 IPR011009 -
Pte13g01601 479 SMART pkinase_C_6 413 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte13g01601 479 CDD STKc_AGC 162 412 IPR045270 GO:0004674|GO:0005524
Pte13g01601 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Pte13g01601 479 FunFam Non-specific serine/threonine protein kinase 153 254 - -
Pte13g01601 479 Pfam Protein kinase domain 156 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01601 479 Pfam Protein kinase C terminal domain 433 474 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pte13g01601 479 Gene3D Phosphorylase Kinase; domain 1 153 452 - -
Pte13g01601 479 ProSiteProfiles Protein kinase domain profile. 156 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01601 479 SMART serkin_6 156 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01601 479 FunFam Non-specific serine/threonine protein kinase 236 431 - -
Pte13g01601 479 ProSiteProfiles AGC-kinase C-terminal domain profile. 413 479 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pte13g01601 479 Gene3D Transferase(Phosphotransferase) domain 1 236 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01601 Pte-Chr13 28664019 28666601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01601 1 476 AGC Kinase Gene Family AT3G08720 54.697 1.06e-180 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Pte13g01601 Pkinase 1.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01601 K04688 - qsa:O6P43_020074 534.643