Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte13g01595 | ATGGCTACTGTTATTTGTGCTGGAAATCTACCTGGTAACAGGAAGGAAGTGATAATGAGAGAGCTTGTTCAGGGTCATCAAATTGCAAACCAGTTGAAAGGTCTCCTTCAAAGGTCTAGGAAATCGGATGAGTCTTTCTCTTCTGCTTTTGAGGGCATTGTGATGAAAATCCACGCATCCTTCACTCGCTGTATCTCTCTACTGGCTTCTGGGGAGTCAGATGGTGAGGTTTGTGAGAATCTACCGATTTCTGGAGCTGAGAACACTTCGCCGCCTGGTGCTGCTTCCTCGGATGACCAAAGATCTGAAGATTCTAGCGAGAGTAGAAAGAGACCACTGGCTGCAAGAAATAGGAGGGGCTGCTACAAAAGAAGGAAGACTGTACAAGCATGGACCACGATTGAACCAACCATAGAAGACGGTCGTGCATGGAGAAAATACGGTCAGAAGGAAATCCTTCATTCCAAATACCCAAGGAGTTACTTTAGGTGTACTCGCAAGTACGACCAAGGATGCCGAGCAACCAAACAAGTCCAACGAATGGAAGAGAATCCGGAAAGGTACCAGATTACATACATAGGTGTTCACACATGCAGACAAAGCACAAAGACTCCACAGATGATCACATCATCAGATTGTGAACCTTGGGAATCATTCCTTAATAACAGTTGTCATGAGAAATATGAACATTCACAAGATTTTTCTGGCTCATTATTGTCAGTTCCAGCCATACAACAAGAATGTCCCAATCAAGAAACCACCACTATTATTGATTTTGCTGCAGATAGTCTTTCTTTGTTAGAGAGTTGTCTGTGGCCTGAGTTCAAGGATAATTTCGATGAACTGTCTGAGACCAGTACTGCTGCAATCATGTTCCCAAAGATGGAGTCTGATCGTAATGGTGATGCATTGCAGTACTCCTGTACAGACAATGTTTCTCAGGGTATTTTTGGGATGGATCTTGAGGTAGATTCTGTTCATTTTGATGACACCCACTTCCATTTCGATGGGGATGATCAGTTCTTGATTGTCAACTAA | 1038 | 0.4335 | MATVICAGNLPGNRKEVIMRELVQGHQIANQLKGLLQRSRKSDESFSSAFEGIVMKIHASFTRCISLLASGESDGEVCENLPISGAENTSPPGAASSDDQRSEDSSESRKRPLAARNRRGCYKRRKTVQAWTTIEPTIEDGRAWRKYGQKEILHSKYPRSYFRCTRKYDQGCRATKQVQRMEENPERYQITYIGVHTCRQSTKTPQMITSSDCEPWESFLNNSCHEKYEHSQDFSGSLLSVPAIQQECPNQETTTIIDFAADSLSLLESCLWPEFKDNFDELSETSTAAIMFPKMESDRNGDALQYSCTDNVSQGIFGMDLEVDSVHFDDTHFHFDGDDQFLIVN* | 346 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte13g01595 | 345 | ProSiteProfiles | WRKY domain profile. | 133 | 196 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01595 | 345 | MobiDBLite | consensus disorder prediction | 83 | 99 | - | - | |
Pte13g01595 | 345 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 21 | 209 | IPR044810 | GO:0003700 | |
Pte13g01595 | 345 | Pfam | WRKY DNA -binding domain | 139 | 199 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01595 | 345 | Gene3D | WRKY domain | 122 | 201 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01595 | 345 | SUPERFAMILY | WRKY DNA-binding domain | 136 | 200 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01595 | 345 | MobiDBLite | consensus disorder prediction | 79 | 119 | - | - | |
Pte13g01595 | 345 | SMART | WRKY_cls | 138 | 200 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte13g01595 | 345 | MobiDBLite | consensus disorder prediction | 100 | 114 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte13g01595 | Pte-Chr13 | 28623944 | 28625941 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte13g01595 | 14 | 275 | WRKY Transcription Factor Family | AT3G56400 | 37.023 | 8.15e-49 | 164 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pte13g01595 | WRKY | 1.4e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte13g01595 | - | - | cill:122292836 | 238.81 |