Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01595 ATGGCTACTGTTATTTGTGCTGGAAATCTACCTGGTAACAGGAAGGAAGTGATAATGAGAGAGCTTGTTCAGGGTCATCAAATTGCAAACCAGTTGAAAGGTCTCCTTCAAAGGTCTAGGAAATCGGATGAGTCTTTCTCTTCTGCTTTTGAGGGCATTGTGATGAAAATCCACGCATCCTTCACTCGCTGTATCTCTCTACTGGCTTCTGGGGAGTCAGATGGTGAGGTTTGTGAGAATCTACCGATTTCTGGAGCTGAGAACACTTCGCCGCCTGGTGCTGCTTCCTCGGATGACCAAAGATCTGAAGATTCTAGCGAGAGTAGAAAGAGACCACTGGCTGCAAGAAATAGGAGGGGCTGCTACAAAAGAAGGAAGACTGTACAAGCATGGACCACGATTGAACCAACCATAGAAGACGGTCGTGCATGGAGAAAATACGGTCAGAAGGAAATCCTTCATTCCAAATACCCAAGGAGTTACTTTAGGTGTACTCGCAAGTACGACCAAGGATGCCGAGCAACCAAACAAGTCCAACGAATGGAAGAGAATCCGGAAAGGTACCAGATTACATACATAGGTGTTCACACATGCAGACAAAGCACAAAGACTCCACAGATGATCACATCATCAGATTGTGAACCTTGGGAATCATTCCTTAATAACAGTTGTCATGAGAAATATGAACATTCACAAGATTTTTCTGGCTCATTATTGTCAGTTCCAGCCATACAACAAGAATGTCCCAATCAAGAAACCACCACTATTATTGATTTTGCTGCAGATAGTCTTTCTTTGTTAGAGAGTTGTCTGTGGCCTGAGTTCAAGGATAATTTCGATGAACTGTCTGAGACCAGTACTGCTGCAATCATGTTCCCAAAGATGGAGTCTGATCGTAATGGTGATGCATTGCAGTACTCCTGTACAGACAATGTTTCTCAGGGTATTTTTGGGATGGATCTTGAGGTAGATTCTGTTCATTTTGATGACACCCACTTCCATTTCGATGGGGATGATCAGTTCTTGATTGTCAACTAA 1038 0.4335 MATVICAGNLPGNRKEVIMRELVQGHQIANQLKGLLQRSRKSDESFSSAFEGIVMKIHASFTRCISLLASGESDGEVCENLPISGAENTSPPGAASSDDQRSEDSSESRKRPLAARNRRGCYKRRKTVQAWTTIEPTIEDGRAWRKYGQKEILHSKYPRSYFRCTRKYDQGCRATKQVQRMEENPERYQITYIGVHTCRQSTKTPQMITSSDCEPWESFLNNSCHEKYEHSQDFSGSLLSVPAIQQECPNQETTTIIDFAADSLSLLESCLWPEFKDNFDELSETSTAAIMFPKMESDRNGDALQYSCTDNVSQGIFGMDLEVDSVHFDDTHFHFDGDDQFLIVN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01595 345 ProSiteProfiles WRKY domain profile. 133 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01595 345 MobiDBLite consensus disorder prediction 83 99 - -
Pte13g01595 345 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 209 IPR044810 GO:0003700
Pte13g01595 345 Pfam WRKY DNA -binding domain 139 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01595 345 Gene3D WRKY domain 122 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01595 345 SUPERFAMILY WRKY DNA-binding domain 136 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte13g01595 345 MobiDBLite consensus disorder prediction 79 119 - -
Pte13g01595 345 SMART WRKY_cls 138 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte13g01595 345 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01595 Pte-Chr13 28623944 28625941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01595 14 275 WRKY Transcription Factor Family AT3G56400 37.023 8.15e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte13g01595 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01595 - - cill:122292836 238.81