Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01592 ATGGCTGCAGTGACAACAGCAGAAAATGGGCCCAAGGCATTGGAGTTCTTAGGGTTGGGGAATACAGGAGAAAGCAGTCCGAATGACAACAGCGGATCAAAAGTGAACCTGATTCTCACGGATTATTGTATGCCAGGGATGACAGGCTATGAGCTACTTAAGAGAATCAAGCAATCATCTGAAATGAGGGAAGTTCCAGTTGTGGTTATGTCATCAGAGAATACTCCAACTCGTGTCAACAAGTGTTTAGCTGAAGGAGCAGAAATGTTCATCCAAAAGCCTCTCAAGCAATCAGATGTGAACAGATTAACATATCAGTTGCTCATGAATGGATGA 336 0.4345 MAAVTTAENGPKALEFLGLGNTGESSPNDNSGSKVNLILTDYCMPGMTGYELLKRIKQSSEMREVPVVVMSSENTPTRVNKCLAEGAEMFIQKPLKQSDVNRLTYQLLMNG* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01592 111 Pfam Response regulator receiver domain 3 100 IPR001789 GO:0000160
Pte13g01592 111 SUPERFAMILY CheY-like 4 106 IPR011006 -
Pte13g01592 111 MobiDBLite consensus disorder prediction 1 32 - -
Pte13g01592 111 Gene3D - 1 110 - -
Pte13g01592 111 ProSiteProfiles Response regulatory domain profile. 1 108 IPR001789 GO:0000160
Pte13g01592 111 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 104 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01592 Pte-Chr13 28602707 28603375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01592 2 108 Response Regulator Gene Family AT3G56380 64.815 1.49e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte13g01592 Response_reg 7.3e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01592 K14492 - gmx:100499827 155.992