Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01589 ATGCAGTATTCAGATCCATCGGGATCCGATTCCAGCTTCCAGGACCAGCATCAACAGCTCAGGCACACCCTCACTCATTATCAACCTCAGGGTTCAACCATGTCTATAGCAAATGGGAATGTTTCTTTCAGGGGTTCTTATCACCGGCGGGCACATTCCGAAGTACATTTTCGATTTTCTGACGACCTTGATCTGGAACTCGATTCATTAGACGTCCCTTTCGAGGATATCGGATCAGAAGACGACCTTTTCTTAACCTATATGAATATTGAGAAGGATGGATCCAAACCCGAAGATGGACCTTTCGGATCTCCCGTTAACAAACCCGAAAACGACAACAACATTGCTCCCGCCAATGCTGCTACGGGTGGTGGCAGTGTGCAGCTGGAGAATTGGGAGGTCGAGAGAAACGGGAAACCCGCGCATGTTCGTAGTAATTCTATTGATGGGTATTCATCAATGGAGAGCATTGAGGCTAAGAAAGCCATGGCTCCTGATAAGCTCGCTGAATTGTGGACCGTTGATCCCAAGCGAGCGAAGAGGATCCTGGCTAATCGACAGTCTGCTTCACGGTCAAAAGAGAGGAAAGCTCGTTATATGTTAGAACTTGAGAGAAAAGTTCAGACCCTTCAGACAGAAGCAACCACTCTCTCTGCTCAATTACACCTTTTTCAGAGAGATACAACTGGCTTGACTAATGAAAATACAGAGCTTAAGCATCGTTTACAAGCTATGGTGCAACAAGCTCAGTTACGAGATGCTCTTAGTGAAGCACTAAAGAAAGAAGTTGAGAAGCTAAAAGTTGCAACTGGAGAGGCTATGACTCCTACTGACACTTTCAGTTTGGGGATGCATGAAATCCCTTTTAGCCAGACTTTCTTCTTGCATCAACAGCAGCATGGTCTAGGTGAAGCCCCAAATACACAAAGGCAGCAGTTTTATCCCTTTGTCTCTAACATGTCAACTCCTCATCAGCCTTTGCTTGGCAACTCACACGACATGTCAGAACTGTTGCAGCAGGATCCCATTGGCCAATTTCAAGGGCTTGAGATAAGCACTCGTGGCTCACGCATAATGAGAGCGGAAAGCCCCTCCACATGCAGTAATGCATTTGAATGCAAAACATACTGA 1131 0.4607 MQYSDPSGSDSSFQDQHQQLRHTLTHYQPQGSTMSIANGNVSFRGSYHRRAHSEVHFRFSDDLDLELDSLDVPFEDIGSEDDLFLTYMNIEKDGSKPEDGPFGSPVNKPENDNNIAPANAATGGGSVQLENWEVERNGKPAHVRSNSIDGYSSMESIEAKKAMAPDKLAELWTVDPKRAKRILANRQSASRSKERKARYMLELERKVQTLQTEATTLSAQLHLFQRDTTGLTNENTELKHRLQAMVQQAQLRDALSEALKKEVEKLKVATGEAMTPTDTFSLGMHEIPFSQTFFLHQQQHGLGEAPNTQRQQFYPFVSNMSTPHQPLLGNSHDMSELLQQDPIGQFQGLEISTRGSRIMRAESPSTCSNAFECKTY* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01589 376 Coils Coil 193 220 - -
Pte13g01589 376 CDD bZIP_plant_RF2 178 227 IPR044759 GO:0003700|GO:0006355
Pte13g01589 376 Pfam bZIP transcription factor 177 225 IPR004827 GO:0003700|GO:0006355
Pte13g01589 376 MobiDBLite consensus disorder prediction 94 115 - -
Pte13g01589 376 Gene3D - 176 228 - -
Pte13g01589 376 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 336 - -
Pte13g01589 376 FunFam probable transcription factor PosF21 176 229 - -
Pte13g01589 376 SUPERFAMILY Leucine zipper domain 177 228 IPR046347 GO:0003700|GO:0006355
Pte13g01589 376 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 238 IPR004827 GO:0003700|GO:0006355
Pte13g01589 376 SMART brlzneu 173 237 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01589 Pte-Chr13 28578327 28581788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01589 30 371 bZIP Transcription Factor Family AT2G40620 51.075 1.00e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte13g01589 bZIP_1 3.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01589 - - qsa:O6P43_020104 405.986