Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01577 ATGACTTTCAAGAGGAGGAATGGAGGACGCAACAAACACGGTCGTGGACATGTCAACTTCATTCGCTGCTCTAACTGCGGCAAATGCTGCCCCAAGGACAAGGCCATCAAGAGGTTCCTTGTGAGGAACATTGTCGAGCAAGCTGCAGTGAGAGATGTTCAAGAAGCTTGTGTCTATGAACAGTACACTCTTCCAAAGCTGTATGTGAAGATGCAGTATTGTGTCTCGTGTGCCATTCACTCTCATGTTGTGAGGGTTCGCTCCCGAACTGACAGAAGGAAACGTGAGCCACCACAGCGTTTCATCAGGCGCAAGGAGGATGTTCCAAGGCCTGGTCAACCTGGACAAGCTCCTCGTCCTGCTGGAGGAGTAGCTCCTCCCCGTGCCTAA 390 0.5154 MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRKEDVPRPGQPGQAPRPAGGVAPPRA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01577 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte13g01577 129 MobiDBLite consensus disorder prediction 86 129 - -
Pte13g01577 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte13g01577 129 FunFam 40S ribosomal protein S26 1 114 - -
Pte13g01577 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Pte13g01577 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 123 IPR000892 GO:0003735|GO:0005840|GO:0006412
Pte13g01577 129 MobiDBLite consensus disorder prediction 90 110 - -
Pte13g01577 129 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01577 Pte-Chr13 28498124 28500398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01577 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 87.069 2.53e-71 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01577 K02976 - gmx:100784958 206.838