Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01572 ATGGTGAATCTGGCTCTCGGTAGCAAGTGCCTCCCTTCATCTGTGAGAGCTCCTCTTCAGAATGGCGTGTTGTTAAAATCCAAGAATCGTATGAAATCTGCACCCAATCTGGTTTTCTCAAATTCTTCTGTCCATGCCAGATGGAACAGGATTTATTTTACACTACGTGAGAGTGGGATTGGAGAGAACCCCAACAGCAAAAGAGAAGCTTTTTCTTCAAAGAACAGAATGGAAGAGTACAACATTGCAATGAAGAGAATGATGAGGAATCCATACGAGTACCATCATGATCTGGGAATGAACTATACTCTAATATCTGATAATTTGATCGTCGGCTCCCAGCCTCAAAAACCTGAAGACATTGATCACCTGAGAAAGGAAGAGGATGTGGCATACATTTTAAATCTGCAGCAGGACAAGGATGTAGATTACTGGGGAATTGACCTGCAATCAATTATAAAGAGATGCAAAGAAGTTGGCATTCGTCACATGAGAAGGCCTGCAAAGGACTTTGATCCAGATTCCTTGCGAAATGGACTGCCGAAAGCTGTTTCATCTGTGGAATGGGCTATTTCTGAAGGGAAAGGAAAAGTATATGTGCATTGCACAGCTGGATTAGGAAGGGCTCCTGCTGTTGCTATTGCTTACATGTTCTGGTTCTGTGACATGAACCTTAACAAAGCATATGATCTTCTAACTTCAAAGAGACCATGTGGACCCAACAGAAGAGCAATTCGAGGAGCTACCTATGATTTAGCTAAGAATGATCCATGGAAGGAGCCGTTTGACAGTCTTCCAGAACATGCATTTGCAGATATCGCAGACTGGGAGAGAAATTTGATTCAAAGCCGTGTTCGTTCTCTCCGTGGAACTTAG 876 0.4281 MVNLALGSKCLPSSVRAPLQNGVLLKSKNRMKSAPNLVFSNSSVHARWNRIYFTLRESGIGENPNSKREAFSSKNRMEEYNIAMKRMMRNPYEYHHDLGMNYTLISDNLIVGSQPQKPEDIDHLRKEEDVAYILNLQQDKDVDYWGIDLQSIIKRCKEVGIRHMRRPAKDFDPDSLRNGLPKAVSSVEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCDMNLNKAYDLLTSKRPCGPNRRAIRGATYDLAKNDPWKEPFDSLPEHAFADIADWERNLIQSRVRSLRGT* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01572 291 ProSiteProfiles Dual specificity protein phosphatase domain profile. 101 258 IPR020422 GO:0006470|GO:0008138
Pte13g01572 291 FunFam Phosphoglucan phosphatase LSF2, chloroplastic 84 291 - -
Pte13g01572 291 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 17 259 - -
Pte13g01572 291 SMART dsp_5 101 244 IPR020422 GO:0006470|GO:0008138
Pte13g01572 291 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 98 243 IPR029021 -
Pte13g01572 291 Gene3D Protein tyrosine phosphatase superfamily 84 291 IPR029021 -
Pte13g01572 291 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 178 237 IPR000387 GO:0016311|GO:0016791
Pte13g01572 291 Pfam Dual specificity phosphatase, catalytic domain 123 240 IPR000340 GO:0008138|GO:0016311
Pte13g01572 291 CDD DSP_laforin-like 100 247 IPR045204 GO:0019203
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01572 Pte-Chr13 28439188 28441976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01572 28 292 Protein tyrosine phosphatase (PTP) family AT3G10940 72.830 5.12e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01572 - - qsa:O6P43_014826 446.817