Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01561 ATGTCACCGGCAACCGGAATAAGTGCTCCACTCTTAGCTGATGACATAGTAGCTGTGCTGCCAGCATCCGTGTCTGGCGCGGTGTTCAATGTCGCTACTTCTGTAATTGGTGCTGGAATTATGTCAATCCCCGCGACTCTGAAGGTTCTAGGTGTAGTTCCGGCGTTCGTGCTCATTCTGATAATTGGCGTGCTTGCTGAAACATCAGTTGAGCTTCTCATGAGATTTACACATTCCGGTGAGACCACAACATATGCCGGTGTCATGAAGGAGGCCTTTGGACCAGTTGGTTCTATAGCTACGCAAGTCTGTGTCATGATCACTAATTTTGGCTGTTTGATTATGTACAACATAATCATTGGTGATGTCCTTTCTGGGGTTCAATCAGATGATATAATTCACTTGGGGATTTTGCAAAAATGGTTTGGAACTCAATGGTGGACCTCCAGGGAATTTGCAGTTCTAGTCATTCTTGTGCTGATATTGTTGCCATTGGTCCTGTTACGTCGCGTAGAATCATTGAGTATCACTTCAGGCATAGCCACTCTTCTTGCATTGGTGTTTGTCGGCATATGTTCTGCGTTGGCAATTGCTGCACTTTTGCGAGGAGAAACGGAGAGACCTAGGCTGTTTCCACTACTAAACCATCAGACCTCTTTCTTCGATCTATTCACTGCTATCCCAGTCATTGTTACAGCGTTCACATTCCATTTCAATGTACATCCTATTGGATTTGAGCTTCGCAAGCCTGCAGACATGACAGTAGCAGTGAGGATAGCATTAACACTATGCGCGGCTATCTACTTTGCCATAGGCTTGTTTGGGTACTTGCTTTTTGGGAATTCCATTCATTCAGACATACTTGTGAATTTTGATCAGAACTCTGGTTCCACAATCAGTTCCATGCTCAATGATTTAGTCCGGTTAAGCTATGCACTGCACATTATCCTGGTGTTCCCACTGTTGAACTTCTCTTTAAGGACCAACATAGATGAACTTCTTTTCCCTAATAAGCCTCTTTTGGTCAATGACAACAAAAGATTTATATGCCTCACTCTTGTATTGCTAGTCCTCAGCTACCTTGCAGCAATAGCATTCCCGGATTTATGGGTAATTTTTCAGTTTCTGGGTTGCACAACTGCAGTGTGCCTTGCCTTCATTTTCCCTGGTGCCATTGTCTTGAGGGATGCGCACGATATATCAACAAGAAGGGACAAGATTGTAGGAGCTGTAATGATCCTACTGGCAGTAGTAACAAGTGCAATTGCTATAGCCACCAACATATACAATAATGTCAGCAGCAAGTCATGA 1311 0.4386 MSPATGISAPLLADDIVAVLPASVSGAVFNVATSVIGAGIMSIPATLKVLGVVPAFVLILIIGVLAETSVELLMRFTHSGETTTYAGVMKEAFGPVGSIATQVCVMITNFGCLIMYNIIIGDVLSGVQSDDIIHLGILQKWFGTQWWTSREFAVLVILVLILLPLVLLRRVESLSITSGIATLLALVFVGICSALAIAALLRGETERPRLFPLLNHQTSFFDLFTAIPVIVTAFTFHFNVHPIGFELRKPADMTVAVRIALTLCAAIYFAIGLFGYLLFGNSIHSDILVNFDQNSGSTISSMLNDLVRLSYALHIILVFPLLNFSLRTNIDELLFPNKPLLVNDNKRFICLTLVLLVLSYLAAIAFPDLWVIFQFLGCTTAVCLAFIFPGAIVLRDAHDISTRRDKIVGAVMILLAVVTSAIAIATNIYNNVSSKS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01561 436 PANTHER AMINO ACID TRANSPORTER 21 419 - -
Pte13g01561 436 Pfam Transmembrane amino acid transporter protein 22 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01561 Pte-Chr13 28381878 28384399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01561 22 430 Amino Acid or Auxin Permease AAAP Family AT3G56200 62.592 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01561 - - qsa:O6P43_020133 626.32