Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01560 ATGGCAGTTGCCGGGACTTGCACCCGGGTCTGGAATTGCATGAAAGACGCAGTTCTTGAAGGTGACATTCCGTTCAACAAGGCCTTTGGGATGAGTGTGTTTGAGCATCATGGGAAAGATTCCAAGTTGAGCCATTTATTCAACGAGGCCATGACTGGTACGAGTACTATGTTCATGAGTGAAGTTTTGAAGCTTTACAAGGGTTTCGAGGGCATTCATTCCCTTGTTGATGTTGGTGGTGGGACTAGGGCTGCCATTCACATGATTACGTTCAAGTATCCCTCCATAAATGGCATTAATTTTGACTTGCTGTTTGTAATTGCAGATGCACCAGAACAACCTTGA 345 0.4522 MAVAGTCTRVWNCMKDAVLEGDIPFNKAFGMSVFEHHGKDSKLSHLFNEAMTGTSTMFMSEVLKLYKGFEGIHSLVDVGGGTRAAIHMITFKYPSINGINFDLLFVIADAPEQP* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01560 114 PANTHER O-METHYLTRANSFERASE 11 110 IPR016461 GO:0008168
Pte13g01560 114 Gene3D Vaccinia Virus protein VP39 1 114 IPR029063 -
Pte13g01560 114 Pfam O-methyltransferase domain 11 113 IPR001077 GO:0008171
Pte13g01560 114 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 112 IPR029063 -
Pte13g01560 114 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 114 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01560 Pte-Chr13 28375275 28380634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01560 11 114 Monolignol Biosynthesis Gene Families AT5G54160 56.731 3.82e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01560 K13066 - csv:101204109 133.65