Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01544 ATGTTGAGCTCATTCCTTAACTTTCGACAACTTCTAGGATTGTTTTGCTTCCAGCTCACTTTGTTTCTGGATATTGAAGTACTCAATTGTATTTTATCTGGTTTTATTTCTTTCTGTGTTTGGTTGACTTTGTTTGAGGAGATGAACAAGAGACGGAAGATGTTCAGAGATCGTTCTAGTCTTCAGGGCTGTTTGGTTTTGTTGTTAGTGTCTCGAAGTTTTGGTCTTTGCTGGTCTATGAATGATGAAGGTAAGGCTCTGCTGAAACTGAGGCAGAGTGTTGAGAGTGACCCTTTTGGTGCTTTGTCGAATTGGGTCGATGATGGATTGGAGTTTGGACCTTGTTCTTGGTTCGGTGTTGAGTGCTCAGACGGAAAAGTAGTTGTCTTGAACCTCAAAGATCTGTGTCTGAGAGGAACTTTACCACCAGCGCTTGCAAGTCTCGTGCACATTAGGTCTATTATTCTGCGGAACAATTTTTTCTTTGGCATCATCCCAGAAGCAATTGGAAAGTTGATGGAGCTAGAATTTGTAGATCTGGGATATAATGACTTCAGGGGACCACTACCAGTTGACTTTGGCTGTAACCCCTCACTCGCTATCCTTCTGTTGGATAACAATTATCTGCTTGGTGGTGTGTCTCCAGAAATTTATGAATTGACATCGGTTTCCAAAAGTCAAGTAGATGAAAACCTGTTATCTAGACCTGCTAAACTACAATCTTGCTCCAGAAGTCGCGTTGCATGGGGCATTGAAGCAGGCCAACGGAGACTGCAGCAGGTTGAACTACATGGTTCTCCAGGGAATATTGAAACTCGACCCCCTCCAACTGATGCACCAGCAACTAATCCACCACCAACTGATCCAAATGATACACGTTCTCCTTCATTTCCTCCTCTAGAACCTCCCGAGTCACCCTCCCCTTCTGCATCTTCAATACCAAACCCAAACTCCAGAGGCCCTCCCAGAAATCATTTTAGAAAATCTTCTACAAGGCATTTGGCAGTACTTATTGGAGCTATCGGCGGTTTCCTATTTATTTTTGCTATCATAGGCATCTATCTCTTTAAAACCAATAAGGTAGCTACTGTTAAACCCTGGGCCACAGGATTAAGCGGACAACTTCAGAAGGCATTTGTGACTGGTGTGCCAAAACTCAAGAGATCTGAGATTGAAGCAGCTTGTGAAGATTTCAGCAACGTCATTTGCACCTCGCCAATTGGTACAGTATACAAGGGGACTTTGTCCAGTGGGGTTGAAATAGCTGTTGCCTCCATAACAGTGACATCTGCTAGGGATTGGCCCAAAAGTTCAGAAGCACAATTTAGGAAGAAGATAGAGGAGTTGTCAAAGGTGAATCACAAGAATTTTGTCAATCTTCTTGGATATTGCCAAGAAGAGGAGCCTTTCACGAGAATGATGGTTTTTGAATATGCTTCAAACGGAACACTCTTTGAGCATTTACACATACAAGAATCTGATCACTTGGATTTGCCGACAAGGCTCAGAATAGCAATGGGAATGGCTTACTGCATGCAGCATATGCACCAGCTAAACCCTCCTGTCACCCACAGTAATCTAAATTCTTCAGCTGTCTATCTAACTGAGGACTATGGTGCAAAAATTTCAGAATTATTTTTCTGGAACGAGATAACTTCAGTTAAGACGAAAGCCCCTGGGGAAAAACACGTAAATGCACCATCTAGAAGTCAAGAAAGGAACGTTTATAGTTTTGGTGTTATATTATTTGAAATGATGACAGGGCAACTACCTTACTCAGTGGATGATGGCTCACTTGAAGACTGGGCATCAAACTATGTAAGGGGGGAACAGCACCTCAAAGAAATTGTGGATCCAACTTTAGATTCTGTTAGAGAAGACCAGCTACAGCAAATTGCTGATTTGATAAAATCATGTTGTCAACCAGACCCACTAAACATACCAACAATGGAAGAAATTTGTGAGATATTGAGGAAGACAACAGGAATCACACCTAAGGTAGCTGCTCCAAAACTCTCTCCTCTTTGGTGGGCTGAGCTTGAGATTATGTCTGCAGATGGGGATTGA 2067 0.4248 MLSSFLNFRQLLGLFCFQLTLFLDIEVLNCILSGFISFCVWLTLFEEMNKRRKMFRDRSSLQGCLVLLLVSRSFGLCWSMNDEGKALLKLRQSVESDPFGALSNWVDDGLEFGPCSWFGVECSDGKVVVLNLKDLCLRGTLPPALASLVHIRSIILRNNFFFGIIPEAIGKLMELEFVDLGYNDFRGPLPVDFGCNPSLAILLLDNNYLLGGVSPEIYELTSVSKSQVDENLLSRPAKLQSCSRSRVAWGIEAGQRRLQQVELHGSPGNIETRPPPTDAPATNPPPTDPNDTRSPSFPPLEPPESPSPSASSIPNPNSRGPPRNHFRKSSTRHLAVLIGAIGGFLFIFAIIGIYLFKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSEIEAACEDFSNVICTSPIGTVYKGTLSSGVEIAVASITVTSARDWPKSSEAQFRKKIEELSKVNHKNFVNLLGYCQEEEPFTRMMVFEYASNGTLFEHLHIQESDHLDLPTRLRIAMGMAYCMQHMHQLNPPVTHSNLNSSAVYLTEDYGAKISELFFWNEITSVKTKAPGEKHVNAPSRSQERNVYSFGVILFEMMTGQLPYSVDDGSLEDWASNYVRGEQHLKEIVDPTLDSVREDQLQQIADLIKSCCQPDPLNIPTMEEICEILRKTTGITPKVAAPKLSPLWWAELEIMSADGD* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01544 688 Gene3D Ribonuclease Inhibitor 79 273 IPR032675 -
Pte13g01544 688 Pfam Leucine rich repeat N-terminal domain 81 123 IPR013210 -
Pte13g01544 688 ProSiteProfiles Protein kinase domain profile. 396 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01544 688 FunFam Inactive receptor-like serine/threonine-protein kinase 370 478 - -
Pte13g01544 688 PANTHER PROTEIN MALE DISCOVERER 2 61 685 - -
Pte13g01544 688 Pfam Protein tyrosine and serine/threonine kinase 402 657 IPR001245 GO:0004672|GO:0006468
Pte13g01544 688 Gene3D Phosphorylase Kinase; domain 1 368 478 - -
Pte13g01544 688 FunFam Nuclear pore complex protein NUP107 80 237 - -
Pte13g01544 688 SUPERFAMILY Protein kinase-like (PK-like) 380 657 IPR011009 -
Pte13g01544 688 Gene3D Transferase(Phosphotransferase) domain 1 479 666 - -
Pte13g01544 688 MobiDBLite consensus disorder prediction 273 310 - -
Pte13g01544 688 SUPERFAMILY L domain-like 79 233 - -
Pte13g01544 688 MobiDBLite consensus disorder prediction 265 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01544 Pte-Chr13 28190934 28194969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01544 68 673 Receptor kinase-like Gene Family AT5G16000 25.984 8.81e-46 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pte13g01544 PK_Tyr_Ser-Thr 1.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01544 - - qsa:O6P43_013817 748.429