Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01531 ATGACGAAATTACCCTTTTCCTCCTTATACTCCGTCATCTTCTTTGTGGCCGTCACCCTTTTTGTCAGAATCGTATTAACTTCGTTACCTTTGTGCTATGCCATCGGTTCCGGTAGCACCCTCGCCGTCAGCTACGGCGCCGCCACCGTCTGCGGTATTGTGGCAAGTGAGGCGAAGCAGCGTATACAATGTTACGGTGGTGGTGAAATAATCCCAGTGGATCCTGACATTTCATACTCATCCATTTCCGGTGGCCGGGACTTCTTCTGTGGACTCAGGTCGGGTGGGTACAGTTTTCTCTGCTGGAACACTATCTCCTCCGATTCCAGCTTCAAAAGTAAGAGGCTTTACAACAATGCTACTGTTCGATTGGAGAATCTTTCAGTTGGAGAGGATCATATTTGTGCTATGGCAGTTGGCACTGGGACTGTTGAATGCTGGAGAGGTGACGACGACTTTGGGTTACCTTCTGAGTCTGATCAATTTGTATCTATCTCATCTGGGTCTGGCTTTTCTTGCGGTATTTTGAAGAATGGATCTCTTGTTAGGTGTTGGGGTTATAACACTTCCATCTCGAGTCAGATACAGAGAGAGTTTGATAATATGCCTATGTTGAGTATTGCAGCTGGATATTCACATGTCTGTGGATTGAATATAACTGGTTTCTTGGTTTGCAAAGGAAACAACAGTTCTGGCCAATTGGATGTGCCTCCAGAAGGACCTATGGAGTACTCAAGCTTCTCACTTGGAGCTGACCATAGCTGTGCAATTAGGAACTCCAATAACTCAGTGGTTTGCTGGGGTGGTGGAGGGCAATACTCTGTGAATGCAATTATGGGGGTTTCATTTGAATTGATTGCTTCAGGGTTGAATTTCACCTGCGGTTTGATAACAAGCAATTTTTCCGTGATTTGCTGGGGGCCTGGATGGCCTATTGTAAATTCTTTAAATCCAAGGTTTGAGATTCCCTTGAGTCCAATTCTTCCGGGGCCTTGCGTACAATCTTCTTGTAGTGAGTGCGGTATATACCCAAAATCCCAAGATTTATGTTCAGGTTCCGGTAGTATTTGCAAGTCTTGTTTGCCTGCGATATCCGTGCCACCAGGCACGTCAAACTCACTACCCTTGGCACCCCTTCCATCAACAACTCCTTCATCATCAACATCTAGACCATTGAGGAGGGGTTTACTGGCATTTGCTATTGTTGGTTCAGTAGGAACATTGGCGGGTCTGTGCACATTGATCTATTGCTTTTGGACTGGAATTTGTTTTGGGAAAAAGAAAGTTCATAATTCAGTACAACCTACAATCACTAGAGAAGCTAGTTCAAATGGCGGACCCGCTTCAAACAACAGTCCTCCTTCGAGATCATCTACCATTAGGCGCCAGGGTTCGAGAATAATGAGGCGGCAGAGGAGTGGAACTTCATCAAAGCATGCAGACAGGGCAGAAGAATTTTCGCTGGCGGAGCTAGCTGCAGCCACAGATAATTTCTCCGTTGAGAACAAGATTGGTGCAGGAAGCTATGGCGTTGTTTATAAAGGCAAACTCGCCGATGGCATTGAAGTGGCAATCAAAAGGGGTGAGACTGGCCTCAAGACAAAGAAATTTCAAGAGAAGGAAACTGCGTTCGAGTCCGAGTTGGCGTTCTTGTCCCGTCTTCACCACAAACACTTAGTTCGGTTGGTAGGTTTCTGTGAAGAAAAGGATGAAAGGCTTTTGGTGTATGAGTACATGAAGAATGGAGCGCTATATGATCATTTACATGATAAGAAAAATGTGGATAAGAGTAGTAGCATTTTGAATTCCTGGAAAATGAGGATCAAAATTGCGCTAGACGCTGCCCGAGGAATTGAGTATCTTCATAATTATGCGGTGCCACCTATAATTCACAGAGACATCAAGTCTTCTAATATTCTGCTAGATTTAAATTGGACAGCAAGAGTATCTGATTTTGGGTTGTCTCTAATGTCCGATCATGACTACAAGCCAATGAAAGCGGTCGGAACAGTGGGGTACATTGATCCTGAGTATTATGGTCTTAATGTATTGACAGCCAAGAGCGATGTCTATGGGCTTGGGATAGTTCTTCTGGAACTTTTGACAGGGAAAAGGGCAATTTTCAAGAGTGATGAAAGTGGAGGAACGCCTATAAGTTTGGTCGATTTCGCAGTTCCTGCAATCACTTCTGGAGAATTGGTAAAAATCCTGGATCCCAGGGTAGGTCCACCAGAATTGAGTTTAACAGAGGCAGTGGAGCTGATAGCCTATACAGCTTTGCATTGTGTGAATTTGGAGGGGAAGGATAGGCCAACGATGACTGACATTGTCGCCAATTTGGAAAGGGCACTGGCTCTCTGTGATGATAGTCATGGAAGCATTTCCAGTGGCACAATTTCTATCGTTTCCGAGTGA 2415 0.4489 MTKLPFSSLYSVIFFVAVTLFVRIVLTSLPLCYAIGSGSTLAVSYGAATVCGIVASEAKQRIQCYGGGEIIPVDPDISYSSISGGRDFFCGLRSGGYSFLCWNTISSDSSFKSKRLYNNATVRLENLSVGEDHICAMAVGTGTVECWRGDDDFGLPSESDQFVSISSGSGFSCGILKNGSLVRCWGYNTSISSQIQREFDNMPMLSIAAGYSHVCGLNITGFLVCKGNNSSGQLDVPPEGPMEYSSFSLGADHSCAIRNSNNSVVCWGGGGQYSVNAIMGVSFELIASGLNFTCGLITSNFSVICWGPGWPIVNSLNPRFEIPLSPILPGPCVQSSCSECGIYPKSQDLCSGSGSICKSCLPAISVPPGTSNSLPLAPLPSTTPSSSTSRPLRRGLLAFAIVGSVGTLAGLCTLIYCFWTGICFGKKKVHNSVQPTITREASSNGGPASNNSPPSRSSTIRRQGSRIMRRQRSGTSSKHADRAEEFSLAELAAATDNFSVENKIGAGSYGVVYKGKLADGIEVAIKRGETGLKTKKFQEKETAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKKNVDKSSSILNSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIKSSNILLDLNWTARVSDFGLSLMSDHDYKPMKAVGTVGYIDPEYYGLNVLTAKSDVYGLGIVLLELLTGKRAIFKSDESGGTPISLVDFAVPAITSGELVKILDPRVGPPELSLTEAVELIAYTALHCVNLEGKDRPTMTDIVANLERALALCDDSHGSISSGTISIVSE* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01531 804 MobiDBLite consensus disorder prediction 437 481 - -
Pte13g01531 804 ProSiteProfiles Protein kinase domain profile. 498 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01531 804 SUPERFAMILY RCC1/BLIP-II 70 307 IPR009091 -
Pte13g01531 804 Pfam Protein kinase domain 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01531 804 SMART serkin_6 498 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01531 804 CDD STKc_IRAK 504 782 - -
Pte13g01531 804 MobiDBLite consensus disorder prediction 437 462 - -
Pte13g01531 804 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 201 790 IPR044815 GO:0004674
Pte13g01531 804 FunFam serine/threonine-protein kinase-like protein CCR1 467 578 - -
Pte13g01531 804 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Pte13g01531 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Pte13g01531 804 Pfam Regulator of chromosome condensation (RCC1) repeat 163 189 - -
Pte13g01531 804 SUPERFAMILY Protein kinase-like (PK-like) 479 780 IPR011009 -
Pte13g01531 804 Gene3D Phosphorylase Kinase; domain 1 459 578 - -
Pte13g01531 804 FunFam Serine/threonine-protein kinase-like protein CCR4 579 797 - -
Pte13g01531 804 Gene3D - 103 319 IPR009091 -
Pte13g01531 804 Gene3D Transferase(Phosphotransferase) domain 1 579 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01531 Pte-Chr13 28045397 28048209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01531 11 805 Receptor kinase-like Gene Family AT3G55950 61.463 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pte13g01531 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01531 - - qsa:O6P43_013857 1112.44