Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01530 ATGACAAAATATTATGACATTGATGATATTATTGCAGAAGAGGAGGTAGATACAAGTTCCCAAATACTTGATATATCCTATTTCTTTGTCCGATTTGATTCACTATTAAACATGCCTCTCTTTCTGAGCTTGCTACAGATTGTCCAAGTTATTTTTCAGAAGACAGTGTCTGGTGTAGGCATTGATCCTAGTTCTGAAACAGATTGGGTTTATGCAGGTTCAAAAGTCGAGTTGCCTTTCTGGCTTGCTCACGAGTTACAGCTGAGACAAGCAGTATCAGTGAATATCCCGTCCTGTTTTAATCAAAAAACCAGACTTGAAATTCAGGCTGATTCTGCTTGTGTGGATCTAAGATCCCGATGTCCATACTTCTATGAATTTGGATGCAAGATTGCACCAATGGTTGGTGATAGAACAATAGGGTTCCTCCTCTTATCTGCATTCAAGAGTAGGTACAAGGAAGTTCTGACAAAAGCTCACACTGCTATATTCACATTATCTTCTAACTTATCGACAATCTTGACAAAAGAAGAGATCAACTTGTATGAGGCAGCTCAGTCCTCCATGGCATCATTCAAAAAATGGCGCATGAGCGGCCCTAGATTTCAGAGAGCTTCTATTCTTGGTAGAAAGAGAAAATCAACATAG 648 0.392 MTKYYDIDDIIAEEEVDTSSQILDISYFFVRFDSLLNMPLFLSLLQIVQVIFQKTVSGVGIDPSSETDWVYAGSKVELPFWLAHELQLRQAVSVNIPSCFNQKTRLEIQADSACVDLRSRCPYFYEFGCKIAPMVGDRTIGFLLLSAFKSRYKEVLTKAHTAIFTLSSNLSTILTKEEINLYEAAQSSMASFKKWRMSGPRFQRASILGRKRKST* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01530 215 CDD GINS_A_psf3 92 196 - -
Pte13g01530 215 CDD GINS_B_Psf3 4 97 - -
Pte13g01530 215 Gene3D - 1 198 IPR038437 -
Pte13g01530 215 SUPERFAMILY PriA/YqbF domain 40 97 - -
Pte13g01530 215 PANTHER UNCHARACTERIZED 1 214 IPR010492 -
Pte13g01530 215 Pfam GINS complex protein 76 179 IPR021151 -
Pte13g01530 215 SUPERFAMILY GINS helical bundle-like 96 197 IPR036224 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01530 Pte-Chr13 28034145 28036925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01530 1 215 Core DNA Replication Machinery Family AT3G55490 59.535 8.02e-90 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01530 K10734 - qsa:O6P43_020202 293.508