Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01521 ATGCATCTCAGAAACCCCAAGACATTTAAGTGTCTAGCTGCAATTGTTCAGTTCTCTTTCCACGTATTGTTCACTTGCATGATATGTGTGCGACCTACCGTTTTCATATATGCATTAGGAAATGACACTGATCGAGTAGCTTTGCTAAACTTCAAAGAATCTATAGACGATGACCCTCATGGGATTCTAAGCTCATGGAAGGATTCTATGAACTTCTGCAACTGGTCAGGTGTTACATGCAGCAGGCTGCACCAGAGAGTGACAGCTTTGAACCTAGAAGGTTATGGATTACGTGGTACCATAACGCCTCATGTTGGTAATCTGACATTTCTTAGATATATAAACCTCAGAAATAACAGCTTCCATGGGTACATGCCACAGGAAATAGGCCGTCTCTACAGACTGCAACATCTCAACCTCACAAATAACTTGTTGGGAGGACCTATACCAGTCAGCTTGTCCAATTGTACTGAGCTCAGGGTAATAGAATTCACAAATAATAGATTGGTTGGCCAGATTCCCACTGTGCTTGGCTCGTTGGCCAAGCTTCAAGTTCTTAACTTTGGATCAAACAATCTTACAGGTGTCATCCCAGCATCCTTTGGGAATTTGTCATCAATTGAGCGTCTATCAGTGGCCTATAATAAATTGGCTGGGAACATTCCATACGAAATAGGCCATTTAAGAAGCTTATCAGTCTTCTCAACAACAAGCAACAACCTGTCTGGTATTGTCCCTTCTTCCATTTTCAACATGTCTTCTCTGACAATACTCTCGATTTCTGTTAATTACTTCAATGGAATTATTCCACCTGATATTGGTCGTACTCTCCCTAACATCCAAAGACTTGGTCTTGGTACCAACGAGTTCTCTGGCACTATCCCCCACTCACTTCCTAACGCTTCTAGGCTTGAAATATTTGATGCAGTATACAACAATTTGGAGGGTCAAGTTCCTAGTAATCTTGGGAGTTTACAAAACTTGTTTTGGCTTGGTCTGGGGAATAATAGGCTAGGAAGTAATTCTACAGAAGACTTGGGGTTTCTGACAAATTTGGTCAACAGCAGTAGCTTACAAATCCTGGATTTAAGTGACAACCAACTAGGAGGCCCTTTGCCGAAATCTATGGTCAATTTTTCGTCTGAGCTTAGCGAATTGTACTTTGGAAACAATCAAATATATGGACCTATTCCTGAGGATATAGGGAATCTTGTTAACTTGATTGTCATAGGTCTGGAGTTTAACCTTTTTTCAGGCAGTATCCCTTCTTCTATAGGGAAGTTGCAAAAGCTTCAAGGACTAGGTTTAGGTCCAAACCAGCTGACTGGATTAATCCCATCCTCCATAGGCAACCTGACTCAGCTGTTCCAGCTTTACTTATTACAGAATAGGTTGCAAGGAAGCATTCCACTAGAAATTAGCAAGTGCCAGAATTTACAGTTGCTGGACATTTCACACAATAACCTAAATGGGGCGATACCTCCACAAGTCATAAGTATCTCTAAACTTACTACATTGGCTAACTTCTCGTACAACACATTCACTGGAAGCCTGCCTGTTGAAGTGGGGAAGTTGACTAGTTTAAATGCTTTAGACGTCTCAGAGAACCATTTGTCTGGGGAGATTCCTGAAGCCATTGGGGAGTGTGAGAGCCTTGAAATTCTAAATTTACAGGGAAACTCCTTCCAGGACATCATACCTTCATCTTTGGTTTCCTTGAAAGGCCTTCGGCATTTAGATCTCTCAAGAAACAACTTATCAGGTCAAATTCCACACGATCTGCAGAATCTTCCTTTTTTGGTTTACTTAAATCTTTCTTTCAATAGCTTGGAAGGAGATCTTCCAGTCAGGGGAGTCTTCCAAAATTTGACTGCAATATCAGTGACCGGAAATACCGAACTTTGTGGAGGTGTTGCAGAACTCAGGCTGCCACCATGCCCTGTCAAAGTCCAAAAACAAGGAAGAAGCCATCATTTTATCTTGAAAGTAACGATCATAGCTGTTTCTGTTGTAGTGTTTGTCATTATACTCCTATTCTTTATTGTCTTTTACATGAAGAGGCAGCCGAAAAGAAAATCAACCTTGGCAACAGAGGAGCTTCCCTCAAATGTTTCTTATCAAAAGCTATTCCAAGCTACCGGAGGATTTGCCACCAGCAATTTAATAGGCTCTGGTAGTTTTGGTTCTGTTTATAAAGGAATCCTGGTTCAAGAAGACAAAGTAGTGGCTGTGAAGGTCCTCAACCTTCAGCAAAAAGGAGCTTCCAAGAGTTTCACGGCCGAATGCAACGTTTTGAGGAATGTGCGGCACCGAAACCTTATTAAGGTGATAACATGTTGCTCCAGCTTAGATTTTGGTGGCAAGGAATTCAAGGCATTGGTTTTTGATTTCATGGAAAATGGATGCTTAGAGAAGTGGCTACATCCAAACACAGGAAATGAAAGCCAATCAGGCACTTTAAGTCTCCTTCAAAGATTAAATATTGCAATCGACGTGGCTTCTGCATTGCATTATCTGCACGATTTATGTGACACACGAATTGTTCATTGTGACTTAAAGCCAAGCAATATACTTCTTGACAATGATATGGTTGCTCATGTATGTGATTTTGGTTTAGCAAGGCTCTTCTACAATGAAAAGGAGTTTTTGCAGAGTCTGACTAGCACAATTGGATTGAAGGGCTCTATTGGCTACGCTGCACCAGAGTATGGAACGGGTGGTAAAGCATCCCCACAAGGTGACGTGTACAGCTTTGGTGTCCTTATATTGGAGATGTTCACAGGAAGAAGACCTACTGATGACATGTTTACGGATGGTTCTAACATCCATAAACATGTCAAAAAGTCATTACCTCAAAGACTTCTTCAAATTGTAGATTTAACCATGCTGCAACCACAATCAAAGAACACAGGAGAAGGAGATAGCAACAATGACATAGAAGCACAAGCTACTACCTCAGAGAAACCAATTCAGATAGATGACATTGTGCACGACTGCTTGCTTTCTGTCCTTACAATTGGACTTGCCTGTTCAATGGAATCACCCAGAGAGAGAATGACAATGAGAAACATCATTGAAGAGCTTCTTTGCATTAAAAATGCTTTGCTCCGTGATGATAATAGTGATCATTAA 3132 0.4109 MHLRNPKTFKCLAAIVQFSFHVLFTCMICVRPTVFIYALGNDTDRVALLNFKESIDDDPHGILSSWKDSMNFCNWSGVTCSRLHQRVTALNLEGYGLRGTITPHVGNLTFLRYINLRNNSFHGYMPQEIGRLYRLQHLNLTNNLLGGPIPVSLSNCTELRVIEFTNNRLVGQIPTVLGSLAKLQVLNFGSNNLTGVIPASFGNLSSIERLSVAYNKLAGNIPYEIGHLRSLSVFSTTSNNLSGIVPSSIFNMSSLTILSISVNYFNGIIPPDIGRTLPNIQRLGLGTNEFSGTIPHSLPNASRLEIFDAVYNNLEGQVPSNLGSLQNLFWLGLGNNRLGSNSTEDLGFLTNLVNSSSLQILDLSDNQLGGPLPKSMVNFSSELSELYFGNNQIYGPIPEDIGNLVNLIVIGLEFNLFSGSIPSSIGKLQKLQGLGLGPNQLTGLIPSSIGNLTQLFQLYLLQNRLQGSIPLEISKCQNLQLLDISHNNLNGAIPPQVISISKLTTLANFSYNTFTGSLPVEVGKLTSLNALDVSENHLSGEIPEAIGECESLEILNLQGNSFQDIIPSSLVSLKGLRHLDLSRNNLSGQIPHDLQNLPFLVYLNLSFNSLEGDLPVRGVFQNLTAISVTGNTELCGGVAELRLPPCPVKVQKQGRSHHFILKVTIIAVSVVVFVIILLFFIVFYMKRQPKRKSTLATEELPSNVSYQKLFQATGGFATSNLIGSGSFGSVYKGILVQEDKVVAVKVLNLQQKGASKSFTAECNVLRNVRHRNLIKVITCCSSLDFGGKEFKALVFDFMENGCLEKWLHPNTGNESQSGTLSLLQRLNIAIDVASALHYLHDLCDTRIVHCDLKPSNILLDNDMVAHVCDFGLARLFYNEKEFLQSLTSTIGLKGSIGYAAPEYGTGGKASPQGDVYSFGVLILEMFTGRRPTDDMFTDGSNIHKHVKKSLPQRLLQIVDLTMLQPQSKNTGEGDSNNDIEAQATTSEKPIQIDDIVHDCLLSVLTIGLACSMESPRERMTMRNIIEELLCIKNALLRDDNSDH* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01521 1043 FunFam Leucine-rich repeat receptor-like protein kinase 41 198 - -
Pte13g01521 1043 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
Pte13g01521 1043 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Pte13g01521 1043 SUPERFAMILY L domain-like 381 636 - -
Pte13g01521 1043 Pfam Protein kinase domain 718 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01521 1043 SMART LRR_typ_2 132 156 IPR003591 -
Pte13g01521 1043 SMART LRR_typ_2 228 252 IPR003591 -
Pte13g01521 1043 SMART LRR_typ_2 525 549 IPR003591 -
Pte13g01521 1043 SMART LRR_typ_2 573 596 IPR003591 -
Pte13g01521 1043 SMART LRR_typ_2 597 622 IPR003591 -
Pte13g01521 1043 SMART LRR_typ_2 180 203 IPR003591 -
Pte13g01521 1043 SMART LRR_typ_2 428 451 IPR003591 -
Pte13g01521 1043 ProSiteProfiles Protein kinase domain profile. 716 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01521 1043 CDD STKc_IRAK 722 1028 - -
Pte13g01521 1043 SMART serkin_6 716 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte13g01521 1043 PANTHER OS04G0122200 PROTEIN 226 1031 - -
Pte13g01521 1043 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Pte13g01521 1043 FunFam Leucine-rich repeat receptor protein kinase EMS1 199 297 - -
Pte13g01521 1043 Gene3D Ribonuclease Inhibitor 352 647 IPR032675 -
Pte13g01521 1043 Gene3D Ribonuclease Inhibitor 229 351 IPR032675 -
Pte13g01521 1043 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Pte13g01521 1043 FunFam LRR receptor-like serine/threonine-protein kinase EFR 686 797 - -
Pte13g01521 1043 Pfam Leucine Rich Repeat 134 156 IPR001611 GO:0005515
Pte13g01521 1043 SUPERFAMILY L domain-like 64 378 - -
Pte13g01521 1043 Pfam Leucine Rich repeat 355 370 IPR001611 GO:0005515
Pte13g01521 1043 SUPERFAMILY Protein kinase-like (PK-like) 695 1029 IPR011009 -
Pte13g01521 1043 Gene3D Ribonuclease Inhibitor 43 155 IPR032675 -
Pte13g01521 1043 Gene3D Ribonuclease Inhibitor 156 228 IPR032675 -
Pte13g01521 1043 Gene3D Transferase(Phosphotransferase) domain 1 798 1042 - -
Pte13g01521 1043 ProSiteProfiles Leucine-rich repeat profile. 575 598 IPR001611 GO:0005515
Pte13g01521 1043 FunFam LRR receptor-like serine/threonine-protein kinase EFR 344 652 - -
Pte13g01521 1043 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Pte13g01521 1043 Gene3D Phosphorylase Kinase; domain 1 696 797 - -
Pte13g01521 1043 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 798 1041 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01521 Pte-Chr13 27947014 27950845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01521 37 1037 Receptor kinase-like Gene Family AT3G47570 44.521 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pte13g01521 Pkinase 4.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01521 - - mnt:112094668 1123.23