Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01515 ATGGCAGTGAACTGCAGTCACAGGCTGGAGCCTAAGCTCGATCCGTACTACTTCGGCAACGCAATTCAGAGCATACCGACTTACGCAACAGCCGGTGAAGTGATCTGGATTGATCTACGGTGGTGCGCGGAGCAGCTGAACAAGAATGTGAAGGCGCACGACGAGGGAACTATAAGGCGGTTCGTGGAGGATTGGGAGAGTCGTCCGAAGTGTTTCCCGCTGGGGAACTTCGACGGTGCATCCATCACAATGGGTAGCTCGCACAGGTTCCCTATGTACGAGAACGATTTCGAGTGGGGTAGACCTTTGGTCGTGAGGAGTGGTGGGGCCAACAAGTTCGACGGTAAGATCTCGGCGTTTCCGGGCAGAGAAGGCAGAGGGATCGTGGATTTGGAAGTGGAGTTGTCGGCTAAAACGATGTCGGTTCTGGAGTCGGATTCGGAGTTCATGCATTACGTGTCGAGCTAG 468 0.5449 MAVNCSHRLEPKLDPYYFGNAIQSIPTYATAGEVIWIDLRWCAEQLNKNVKAHDEGTIRRFVEDWESRPKCFPLGNFDGASITMGSSHRFPMYENDFEWGRPLVVRSGGANKFDGKISAFPGREGRGIVDLEVELSAKTMSVLESDSEFMHYVSS* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01515 155 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 150 - -
Pte13g01515 155 Pfam Transferase family 1 150 - -
Pte13g01515 155 Gene3D - 1 150 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01515 Pte-Chr13 27903562 27904709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01515 1 144 Monolignol Biosynthesis Gene Families AT5G48930 26.351 7.53e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01515 - - csav:115705716 264.233