Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01488 ATGACTGGAATCTGCTGCGGTGTTGCTGTGGGAGAAGGAGAGGGGGCAACAGCTCATGTAGAGCCCGTTTCCCGGATATCAAGACGCAGTAGGTTAGATATGTTACAGTTGAAATATATGGCTACCGAAGTCGTGGGGCCTGCATCTCCTCTTGGCCGTCGTAAACGCCATAAGTCTTCGAATCCCGGTCCTGAATCAGCCTCTCCAACCCCAGTATTTGAAAACTCTCTGGATAATTGTAAACCGAGTACAGAAGAGCACGACGAGAATAAGCTAGGTTTGCAAAGAGGTGAAGTCTTGGGCGCTTGCTCGAACTCGTTACCCTTTGACGATTCTCCAAAATTTGGCGTTACCTCTGTTTGTGGTAGGAGGAGGGATATGGAAGACGCGGTTTCAGTGCGTCCATCATTTTGCGAACAGCAGAGTGGACTTGGGGAAGGGTTTCATTTCTACGGTCTATATGATGGCCATGGTTGCTCTCATGTAGCGAATATGTGCAAGGACAGAATGCATGAAATAGTGAAGGAAGAGGTCAAAGTAGCAGTAGAAGCGAGTTTGGATTGGAAAGATGTCATGGAAAGAAGCTTCAATCGTGTGGACGGTGAAGCTTCTAACCCTTCCAATACTGCGCAGCGCTCCAGTTGCAAATGCGAGCTACAGACGCCACACTGTGAAGCCGTTGGATCCACTGCCGTTGTGGCCGTTGTTACACCAGATAAAATCGTAGTCTCCAACTGCGGCGATTCCCGAGCAGTCCTCTGCCGAAACGGCGTCGCTGTGCCCCTCTCTTCCGATCACAAGCCCGACCGTCCCGATGAGTTACTCCGAATCGAAGCCGCGGGGGGTCGTGTCATATATTGGGATGGCCCACGAGTTCTCGGAGTCCTTGCCATGTCCAGAGCCATCGGTGACAGTTATCTGAAACCTTATGTGATATCTGAACCGGAGGTGACGATTACAGATCGGACAGCGGAAGATGAGTGTCTGATCTTGGCAAGTGATGGGTTGTGGGACGTGGTATCAAACGACACCGCATGTAGTGTCGCACGCATGTGCCTTAGGGCACATAAACGGCCGTCTCCACCCGGATCTCCGGGAGAGGATGTGGGTTTTGGGTCGGGAATGGATCCTTCAGACAAGGCGTGTGCCGATGCATCCATGTTGTTAACGAAGTTGGCATTAGCTCGTCATAGCACAGATAATGTTAGCGTGGTGGTGGTCCACTTGAAATGA 1233 0.5109 MTGICCGVAVGEGEGATAHVEPVSRISRRSRLDMLQLKYMATEVVGPASPLGRRKRHKSSNPGPESASPTPVFENSLDNCKPSTEEHDENKLGLQRGEVLGACSNSLPFDDSPKFGVTSVCGRRRDMEDAVSVRPSFCEQQSGLGEGFHFYGLYDGHGCSHVANMCKDRMHEIVKEEVKVAVEASLDWKDVMERSFNRVDGEASNPSNTAQRSSCKCELQTPHCEAVGSTAVVAVVTPDKIVVSNCGDSRAVLCRNGVAVPLSSDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDSYLKPYVISEPEVTITDRTAEDECLILASDGLWDVVSNDTACSVARMCLRAHKRPSPPGSPGEDVGFGSGMDPSDKACADASMLLTKLALARHSTDNVSVVVVHLK* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01488 410 Gene3D - 109 410 IPR036457 -
Pte13g01488 410 MobiDBLite consensus disorder prediction 46 75 - -
Pte13g01488 410 FunFam Protein phosphatase 2C 37 109 410 - -
Pte13g01488 410 SUPERFAMILY PP2C-like 113 410 IPR036457 -
Pte13g01488 410 SMART PP2C_4 104 407 IPR001932 -
Pte13g01488 410 CDD PP2Cc 114 409 IPR001932 -
Pte13g01488 410 PANTHER PROTEIN PHOSPHATASE 76 409 IPR015655 GO:0004722|GO:0006470
Pte13g01488 410 ProSiteProfiles PPM-type phosphatase domain profile. 114 409 IPR001932 -
Pte13g01488 410 ProSitePatterns PPM-type phosphatase domain signature. 150 158 IPR000222 GO:0043169
Pte13g01488 410 Pfam Protein phosphatase 2C 115 401 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01488 Pte-Chr13 27600682 27602656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01488 1 384 PP2C-type Phosphatase Gene Family AT3G11410 56.642 1.40e-137 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01488 K14497 - jre:108983349 486.108