Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01483 ATGGCGAATCGTTGGTGGGCTGCTAGCATGGCAATGGGAGGTGCAGAACCCGAGTCGCCTTCTCCATCTCTTCAGCTGAGGAACCCTGGTGAAGATGACCATGGAGGATTGAACAGACTGGGACCTGGAAGAGAAGAGTTGATGGAGACTGCAAAGAATGACAGTAACAACACTCCAACCAATAGCAGCACCAGTGTCAGCACTAACCCCAATACCAAAACTGCCTCGCTGACACAAAACGATGATGATGGTCCAGACAAGGACCACGAAGCTGATAATCAAAACTCAGGTGGCCGAGAAACTCCGGAGCCTGGTAGTAGTGGTCGGCGACCTCGAGGTCGACCTGCAGGGTCGAAGAACAGACTAAAACCACCAGTAGTGATTACTAAAGAAAGCCCCAATGCACTGAGAAGCCAAATTCTGGAAATCAATAGTGGAAGTGATATCGCTGAGAGTATTTCTACCTTTGCAAATCGAAGGCATAGAGGGGTATCAGTCCTTAGTGGTAGTGGAATTGTTACAAACGTTACACTCAAACAACCAGCTGCACCTGGTGGGGTGATTACTCTACATGGAAGGTTCGAGATATTGTCCCTATCAGGTGCCTTTCTTCCTGCACCATCTCCACCGGGGGTTAGTGGGCTCTCTGTGTATTTGGCCGGTCAGCAGGGTCAGGTTGTTGGTGGTAGTGTAATGGGTTCACTGGTGGCTTCAGGGCCTGTGATGGTGATTGCGGCGACTTTTAGCAATGCAACATATGAAAGATTGCCTATAGAGGATGAGCCGTCTGCGGAAGGATTGCAGGTGCAGCCACAATCAAAAGTGAATACGGGGACTACAAGTGGAAATTCAACTTCTGAAAGTTTGGGTAAACAGGTTCCCATTTCTATGTATAACTTGCCCCCAAATTTGGTGCCAAATGGTCAGATGGCACATGATGTGTTCTGGGGTCCTCCATCTCGCCCTCCTCCCTCCTATTAA 981 0.4913 MANRWWAASMAMGGAEPESPSPSLQLRNPGEDDHGGLNRLGPGREELMETAKNDSNNTPTNSSTSVSTNPNTKTASLTQNDDDGPDKDHEADNQNSGGRETPEPGSSGRRPRGRPAGSKNRLKPPVVITKESPNALRSQILEINSGSDIAESISTFANRRHRGVSVLSGSGIVTNVTLKQPAAPGGVITLHGRFEILSLSGAFLPAPSPPGVSGLSVYLAGQQGQVVGGSVMGSLVASGPVMVIAATFSNATYERLPIEDEPSAEGLQVQPQSKVNTGTTSGNSTSESLGKQVPISMYNLPPNLVPNGQMAHDVFWGPPSRPPPSY* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01483 326 MobiDBLite consensus disorder prediction 266 292 - -
Pte13g01483 326 ProSiteProfiles PPC domain profile profile. 133 271 IPR005175 -
Pte13g01483 326 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 261 - -
Pte13g01483 326 CDD DUF296 140 248 IPR005175 -
Pte13g01483 326 Gene3D - 137 276 - -
Pte13g01483 326 MobiDBLite consensus disorder prediction 52 79 - -
Pte13g01483 326 MobiDBLite consensus disorder prediction 262 292 - -
Pte13g01483 326 MobiDBLite consensus disorder prediction 80 96 - -
Pte13g01483 326 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 67 317 IPR014476 GO:0003680
Pte13g01483 326 MobiDBLite consensus disorder prediction 32 51 - -
Pte13g01483 326 MobiDBLite consensus disorder prediction 1 126 - -
Pte13g01483 326 Pfam Plants and Prokaryotes Conserved (PCC) domain 139 250 IPR005175 -
Pte13g01483 326 FunFam AT-hook motif nuclear-localized protein 136 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01483 Pte-Chr13 27527178 27528758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01483 1 327 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 51.929 7.57e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01483 - - qsa:O6P43_020634 410.609