Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01476 ATGAGTGAGGAAGAGATCAATGCTCTTCCTATTCACAAGTACAAGAAGAAGCAAGATACATCAGATACAGTTGGGAACAGAAAAACTACTGAAGATGAATTAACTTGCAGTGTATGCTTGGAGCAAGTTAATACGGGAGACCTACTCCGTACCTTAACTTGCTTGCATAAGGTTTTTGATCTTGCCAAACACTTCCTTAGCTTCAAAGTTTATGACAGATCTCTTGGATGCTTACATTTTGGTGCCTCTACTTTACACAAGTTCTCCAATCCAATTATTATAGCCAACATTTGA 294 0.381 MSEEEINALPIHKYKKKQDTSDTVGNRKTTEDELTCSVCLEQVNTGDLLRTLTCLHKVFDLAKHFLSFKVYDRSLGCLHFGASTLHKFSNPIIIANI* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01476 97 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 65 IPR013083 -
Pte13g01476 97 SUPERFAMILY RING/U-box 13 57 - -
Pte13g01476 97 PANTHER TARGET OF ERK KINASE MPK-1 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01476 Pte-Chr13 27314268 27319576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01476 1 57 C3H Transcription Factor Family AT3G55530 51.316 2.68e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01476 K16283 - rcu:8258399 85.1149