Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01466 ATGACTGCTATTGCTCAAGTACGGACTGTCTACTCATACGTTGGTGAGAGTAAGGCTCTAAATTCCTATTCTGATGCTATACAAAACACATTAAAGCTTGGTTACAAGGCTGGAATGGCCAAAGGTCTTGGCCTAGGATGTACTTATGGCATAGCCTGCATGTCATGGGCACTTGTTTTCTGGTATGCTGGGGTTTTCATCAGGAATGGACAGACTGATGGAGGCAAGGCATTTACAGCTATTTTTTCTGCCATCGTCGGTGGCATGAGTTTGGGTCAGTCATTTTCAAATCTTAGTGCCTTTAGTAAAGGCAAAGCAGCTGGTTATAAATTGATGGAAATCATCAAGCAAAAGCCTTCAATAGTAGAAGACACTTCTGATGGGAAGTGTCTAGCTGAGATTAATGGCAATATTGAGTTTAAGGATGTCAATTTCAGCTATCCATCAAGGCCTGATGTAATGATATTTCGCAATTTTTCAATTTTCTTCCCTGCTGGAAAAACTGTTGCAGTTGTTGGTGGAAGTGGTTCAGGGAAAAGCACTGTTGTTGCATTGATAGAAAGATTCTACGATCCAAATGAAGGGCAAGTTTTGCTGGATAATGTGGACATAAAGACCCTTCAGTTGAGATGGTTACGCGATCAAATTGGACTGGTGAATCAAGAACCTGCTCTCTTTGCGACTACCATCCTTGAGAATATACTCTATGGCAAACCTGATGCAACCATGGCTGAAGTTGAAGCTGCTACTACTGCTGCAAACGCACATAGCTTTATTACCTTGCTACCCAATGGATATAACACTCAGGTTGGGGAGCGTGGAGTCCAATTGTCTGGTGGCCAGAAACAGAGAATTGCTATTGCCAGAGCAATGTTGAAAAATCCTAAGATTCTTCTCCTCGATGAAGCCACTAGTGCCCTTGATGCTGGTTCTGAAAGCATAGTTCAGGAGGCACTAGACCGTCTAATGGTTGGGCGAACAACAGTTGTCGTGGCCCATCGTCTATCTACCATTAGAAATGTCGATTCAATTGCAGTAATACAGCAAGGACAAGTTGTTGAGACAGGAACACATGAAGAACTAATTGTCAAAGCTGGGACTTATGCTTCACTAATCAGATTCCAAGAAATGGTGGGAAAGAGAGACTTCTCAAATCCATCAACTCGCCGTACACGTTCATCACGCTTGAGTCATTCCTTGTCTACTAAATCTCTAAGCCTTCGTTCTGGTAGCTTGAGAAACTTGAGCTATCAGTTTAGTACCGGAGCTGATGGTCGTATAGAGATGATCTCAAATGCTGAAACTGATAAGAAGACTCCTGCTCCTAGTGGATATTTCTGCAGACTGCTCAAGTTAAATGCTCCCGAATGGCCTTACTCTATAATGGGGGCTGTGGGTTCTATACTTTCTGGTTTCATCGGTCCAACTTTTGCCATTGTGATGAGCAACATGATTGAGGTGTTCTACTACAGAAATTTTGCCTCCATGGAAAAGAAGACCAAGGAATATGTCTTCATCTACATAGGAGCTGGTCTATATGCTGTTGGCGCATATCTAATTCAGCATTACTTCTTCAGTATCATGGGAGAAAACCTTACTACTAGAGTAAGGAGAATGATGCTTGCAGCGATATTGAGGAATGAAGTTGGATGGTTCGATGAGGATGAGCACAATTCAAGCCTCCTTGCAGCTCGCCTCACTACTGATGCTGCTGATGTGAAGTCTGCAATTGCTGAGAGGATCTCCGTTATACTTCAGAACATGACTTCACTTCTTACTTCATTCATAGTGGCTTTCATAGTGGAATGGAGGGTTTCCCTTCTTATCTTGGCTACTTTTCCTCTTCTTGTTCTTGCCAACTTTGCTCAACAATTATCTCTCAAAGGCTTTGCGGGGGACACAGCTAAGGCTCATGCCAAGACAAGCATGATTGCAGGAGAGGGAGTGAGCAACATCAGAACTGTTGCTGCTTTCAATAGCCAAAATAAGATCCTTTCACTTTTTTGCCATGAGCTCCGTATCCCCCAGCTTCAAAGTTTGCGCAAGAGCCAAACTTCTGGCCTCTTATTTGGTCTATCTCAGCTTGCTCTATATGCATCTGAAGCACTCATTCTATGGTACGGTGCACATCTTGTGAGCAGAGGGGTCTCTACTTTCTCAAAGGTTATTAAAGTCTTTGTGGTGCTAGTTATTACGGCAAACTCAGTTGCTGAAACTGTCAGCCTTGCACCTGAGATCATAAGAGGTGGTGAGGCAGTTGGCTCAGTCTTTTCTATCCTCGATAGACCAACTAGGATCGACCCAGATGACCCTGACGCTGAGCCAGTGGAAACGGTTCGCGGAGAAATTGAACTTAGACATGTTGATTTCGCCTATCCTTCGAGGCCTGATATCATGGTTTTCAAAGATTTTAACCTTCGAATTCGTGCTGGACAGAGTCAAGCACTCGTCGGTGCAAGTGGATCTGGCAAAAGTTCTGTTATCGCACTCATTGAGCGTTTCTATGATCCCATTGGTGGAAAAGTTATGATAGATGGAAAGGATGTGAGGAAACTGAATTTGAGGTCCTTAAGGCTTAAAATTGGATTAGTACAACAGGAGCCAGCACTTTTTGCAGCAAGCATTTTCGATAACATCGCCTATGGCAAGGATGGTGTAACCGAAGCAGAAGTAATTGAAGCAGCAAAAGCAGCTAATGTTCATGCATTTGTAAGTGGTTTGCCTGATGGTTACAAGACACCGGTTGGTGAAAGAGGCGTTCAGCTCTCTGGTGGGCAGAAACAAAGGATTGCAATAGCTAGGGCTGTGCTCAAAGACCCCACAATACTTCTACTAGATGAAGCCACTAGTGCACTTGATGCTGAATCCGAGTGTGTGCTACAAGAAGCTCTTGAGAGACTCATGAGGGGCCGTACCACAGTGCTTGTCGCACACCGTTTGTCGACAATAAGGGGTGTGGATAGTATTGGTGTTGTACAAGATGGGAGGATTGTAGAGCAAGGCAGCCATGGTGAACTTGTCAGCAGGCCCGATGGGGCATATTCAAGACTCTTGCAGCTTCAACATCATCATGCATGA 3078 0.4405 MTAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLSAFSKGKAAGYKLMEIIKQKPSIVEDTSDGKCLAEINGNIEFKDVNFSYPSRPDVMIFRNFSIFFPAGKTVAVVGGSGSGKSTVVALIERFYDPNEGQVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAATTAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIVKAGTYASLIRFQEMVGKRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQFSTGADGRIEMISNAETDKKTPAPSGYFCRLLKLNAPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYRNFASMEKKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEDEHNSSLLAARLTTDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNSQNKILSLFCHELRIPQLQSLRKSQTSGLLFGLSQLALYASEALILWYGAHLVSRGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRPTRIDPDDPDAEPVETVRGEIELRHVDFAYPSRPDIMVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIGGKVMIDGKDVRKLNLRSLRLKIGLVQQEPALFAASIFDNIAYGKDGVTEAEVIEAAKAANVHAFVSGLPDGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDSIGVVQDGRIVEQGSHGELVSRPDGAYSRLLQLQHHHA* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01466 1025 FunFam ABC transporter B family member 19 128 376 - -
Pte13g01466 1025 CDD ABC_MTABC3_MDL1_MDL2 783 1021 - -
Pte13g01466 1025 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 103 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01466 1025 PANTHER ABC TRANSPORTER B FAMILY 3 473 IPR039421 -
Pte13g01466 1025 Gene3D - 136 399 IPR027417 -
Pte13g01466 1025 Pfam ABC transporter transmembrane region 461 732 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01466 1025 Pfam ABC transporter transmembrane region 3 88 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01466 1025 SUPERFAMILY ABC transporter transmembrane region 3 123 IPR036640 GO:0005524|GO:0016020
Pte13g01466 1025 SUPERFAMILY ABC transporter transmembrane region 442 770 IPR036640 GO:0005524|GO:0016020
Pte13g01466 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 772 1021 IPR027417 -
Pte13g01466 1025 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 375 IPR027417 -
Pte13g01466 1025 Gene3D ABC transporter type 1, transmembrane domain 3 757 IPR036640 GO:0005524|GO:0016020
Pte13g01466 1025 CDD ABC_MTABC3_MDL1_MDL2 138 375 - -
Pte13g01466 1025 Pfam ABC transporter 157 305 IPR003439 GO:0005524
Pte13g01466 1025 ProSitePatterns ABC transporters family signature. 277 291 IPR017871 GO:0005524|GO:0016887
Pte13g01466 1025 Gene3D - 773 1025 IPR027417 -
Pte13g01466 1025 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 138 374 IPR003439 GO:0005524
Pte13g01466 1025 Pfam ABC transporter 802 950 IPR003439 GO:0005524
Pte13g01466 1025 ProSitePatterns ABC transporters family signature. 922 936 IPR017871 GO:0005524|GO:0016887
Pte13g01466 1025 CDD ABC_6TM_Pgp_ABCB1_D2_like 450 766 - -
Pte13g01466 1025 SMART AAA_5 165 357 IPR003593 GO:0016887
Pte13g01466 1025 SMART AAA_5 810 996 IPR003593 GO:0016887
Pte13g01466 1025 FunFam ABC transporter B family member 1 440 749 - -
Pte13g01466 1025 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 785 1019 IPR003439 GO:0005524
Pte13g01466 1025 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 461 748 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01466 1025 FunFam ABC transporter B family member 19 773 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01466 Pte-Chr13 26883646 26888680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01466 3 375 Calmodulin-binding Proteins AT2G36910 47.074 2.28e-96 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01466 K05658 - gmx:100797124 1819.67