Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01458 ATGAGAAGTGGAGACAAAAGTCTAAGGACCTTCCACCTGCACCTACCTCATGTTCATCATCATCATCATCATCATAACCATGGGAAGAAGCAAGTTTTCAAAGATGTTCCCAAAGGGTGTATGGCAATCAAAGTGGGACAAGGAGAAGAGCAGCAGAGATTTGTGGTGCCTGTGATGTACGTGAATCACCCACTATTCATGCAGCTGTTGAAAGAGGCTGAAGAAGAGTATGGGTTTGATCAAAAAGGTACCATTACAATCCCTTGCCATGTGGAGGAGTTTAGGTACGTCCAAGGCATGATTGACAGGGAGAAGTCCCTTCATCACCACCATCATCATCATGTTGGCTGCTTTGGATTTTGA 363 0.4463 MRSGDKSLRTFHLHLPHVHHHHHHHNHGKKQVFKDVPKGCMAIKVGQGEEQQRFVVPVMYVNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGMIDREKSLHHHHHHHVGCFGF* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01458 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 96 IPR003676 GO:0009733
Pte13g01458 120 Pfam Auxin responsive protein 30 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01458 Pte-Chr13 26588569 26589750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01458 35 113 Calmodulin-binding Proteins AT5G20810 48.750 1.65e-20 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01458 K14488 - cave:132187600 172.17