Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01455 ATGGCTGATGCTACCACGCAGCCTAAAGCATTGACTGAAGCTGAGAAGAAGAAGGAGCAGAGCTTACCCTTTTACAAGCTTTTCTCTTTCTCAGACAAGTATGATTGGGTGCTCATGATTTCTGGAAGCTTAGGAGCTATTGTGCATGGCTCCTCAATGCCTGTTTTTTTCCTTCTCTTTGGTGAAATGGTTAACGGGTTTGGCGAAAACCAGTCCGATTTGAAGAAAATGACTGAAGAAGTGTCCAAGTTCTATCCAACTGTCTATTGCTGCAAATCAAAACCAAAATTACTTCTTACAGAGATTTCATGCTGGATGTACACTGGAGAGAGACAGACAAGTACATTGAGAAAAAAGTATTTGGAAGCTGTGCTGAAACAGGACGTTGGGTTCTTTGATACTGACGCTAGAACTGGGGATATTGTGTTCAGTGTGTCCACAGACACGTTGCTTGTCCAAGATGCTATCAGTGAGAAGGTCGGCAACTTCATACATTATCTTTCAACGTTCCTTGCTGGACTTGTGGTTGGTTTTGTGTCTGCGTGGAGGCTAGCTCTTCTAAGTATAGCTGTAATTCCAGGCATTGCATTTGCTGGTTGCCTCTATGCTTACACTCTCACTGGTCTAACGTCCAAGAGTAGAGAATCATATGCTAATGCTGGCATAATAGCTGAGCAGGCTATTGCTCAAGTACGGACTGTCTACTCATACGTTGGTGAGAGTAAGGCTCTAAATTCCTATTCTGATGCTATACAAAACACATTAAAGCTTGGTTACAAGGCTGGAATGGCCAAAGGTCTTGGCCTAGGATGTACTTATGGCATAGCCTGCATGTCATGGGCACTTGTTTTCTGGTATGCTGGGGTTTTCATCAGGAATGGACAGACTGATGGAGGCAAGGCATTTACAGCTATTTTTTCTGCCATCGTCGGTGGCATGAGTTTGGGTCAGTCATTTTCAAATCTTAGTGCCTTTAGTAAAGGCAAAGCAGCTGGTTATAAATTGATGGAAATCATCAAGCAAAAGCCTTCAATAGTAGAAGACACTTCTGATGGGAAGTGTCTAGCTGAGATTAATGGCAATATTGAGTTTAAGGATGTCAATTTCAGCTATCCATCAAGGCCTGATGTAATGATATTTCGCAATTTTTCAATTTTCTTCCCTGCTGGAAAAACTGTTGCAGTTGTTGGTGGAAGTGGTTCAGGGAAAAGCACTGTTGTTGCATTGATAGAAAGATTCTACGATCCAAATGAAGCAGGGCAAGTTTTGCTGGATAATGTGGACATAAAGACCCTTCAGTTGAGATGGTTACGCGATCAAATTGGACTGGTGAATCAAGAACCTGCTCTCTTTGCGACTACCATCCTTGAGAATATACTCTATGGCAAACCTGATGCAACCATGGCTGAAGTTGAAGCTGCTACTACTGCTGCAAACGCACATAGCTTTATTACCTTGCTACCCAATGGATATAACACTCAGGTTGGGGAGCGTGGAGTCCAATTGTCTGGTGGCCAGAAACAGAGAATTGCTATTGCCAGAGCAATGTTGAAAAATCCTAAGATTCTTCTCCTCGATGAAGCCACTAGTGCCCTTGATGCTGGTTCTGAAAGCATAGTTCAGGAGGCACTAGACCGTCTAATGGTTGGGCGAACAACAGTTGTCGTGGCCCATCGTCTATCTACCATTAGAAATGTCGATTCAATTGCAGTAATACAGCAAGGACAAGTTGTTGAGACAGGAACACATGAAGAACTAATTGTCAAAGCTGGGACTTATGCTTCACTAATCAGATTCCAAGAAATGGTGGGAAAGAGAGACTTCTCAAATCCATCAACTCGCCGTACACGTTCATCACGCTTGAGTCATTCCTTGTCTACTAAATCTCTAAGCCTTCGTTCTGGTAGCTTGAGAAACTTGAGCTATCAGTTTAGTACCGGAGCTGATGGTCGTATAGAGATGATCTCAAATGCTGAAACTGATAAGAAGACTCCTGCTCCTAGTGGATATTTCTGCAGACTGCTCAAGTTAAATGCTCCCGAATGGCCTTACTCTATAATGGGGGCTGTGGGTTCTATACTTTCTGGTTTCATCGGTCCAACTTTTGCCATTGTGATGAGCAACATGATTGAGGTGTTCTACTACAGAAATTTTGCCTCCATGGAAAAGAAGACCAAGGAATATGTCTTCATCTACATAGGAGCTGGTCTATATGCTGTTGGCGCATATCTAATTCAGCATTACTTCTTCAGTATCATGGGAGAAAACCTTACTACTAGAGTAAGGAGAATGATGCTTGCAGCGATATTGAGGAATGAAGTTGGATGGTTCGATGAGGATGAGCACAATTCAAGCCTCCTTGCAGCTCGCCTCACTACTGATGCTGCTGATGTGAAGTCTGCAATTGCTGAGAGGATCTCCGTTATACTTCAGAACATGACTTCACTTCTTACTTCATTCATAGTGGCTTTCATAGTGGAATGGAGGGTTTCCCTTCTTATCTTGGCTACTTTTCCTCTTCTTGTTCTTGCCAACTTTGCTCAACAATTATCTCTCAAAGGCTTTGCGGGGGACACAGCTAAGGCTCATGCCAAGACAAGCATGATTGCAGGAGAGGGAGTGAGCAACATCAGAACTGTTGCTGCTTTCAATAGCCAAAATAAGATCCTTTCACTTTTTTGCCATGAGCTCCGTATCCCCCAGCTTCAAAGTTTGCGCAAGAGCCAAACTTCTGGCCTCTTATTTGGTCTATCTCAGCTTGCTCTATATGCATCTGAAGCACTCATTCTATGGTACGGTGCACATCTTGTGAGCAGAGGGGTCTCTACTTTCTCAAAGGTTATTAAAGTCTTTGTGGTGCTAGTTATTACGGCAAACTCAGTTGCTGAAACTGTCAGCCTTGCACCTGAGATCATAAGAGGTGGTGAGGCAGTTGGCTCAGTCTTTTCTATCCTCGATAGACCAACTAGGATCGACCCAGATGACCCTGACGCTGAGCCAGTGGAAACGGTTCGCGGAGAAATTGAACTTAGACATGTTGATTTCGCCTATCCTTCGAGGCCTGATATCATGGTTTTCAAAGATTTTAACCTTCGAATTCGTGCTGGACAGAGTCAAGCACTCGTCGGTGCAAGTGGATCTGGCAAAAGTTCTGTTATCGCACTCATTGAGCGTTTCTATGATCCCATTGGTGGAAAAGTTATGATAGATGGAAAGGATGTGAGGAAACTGAATTTGAGGTCCTTAAGGCTTAAAATTGGATTAGTACAACAGGAGCCAGCACTTTTTGCAGCAAGCATTTTCGATAACATCGCCTATGGCAAGGATGGTGTAACCGAAGCAGAAGTAATTGAAGCAGCAAAAGCAGCTAATGTTCATGCATTTGTAAGTGGTTTGCCTGATGGTTACAAGACACCGGTTGGTGAAAGAGGCGTTCAGCTCTCTGGTGGGCAGAAACAAAGGATTGCAATAGCTAGGGCTGTGCTCAAAGACCCCACAATACTTCTACTAGATGAAGCCACTAGTGCACTTGATGCTGAATCCGAGTGTGTGCTACAAGAAGCTCTTGAGAGACTCATGAGGGGCCGTACCACAGTGCTTGTCGCACACCGTTTGTCGACAATAAGGGGTGTGGATAGTATTGGTGTTGTACAAGATGGGAGGATTGTAGAGCAAGGCAGCCATGGTGAACTTGTCAGCAGGCCCGATGGGGCATATTCAAGACTCTTGCAGCTTCAACATCATCATGCATGA 3753 0.4394 MADATTQPKALTEAEKKKEQSLPFYKLFSFSDKYDWVLMISGSLGAIVHGSSMPVFFLLFGEMVNGFGENQSDLKKMTEEVSKFYPTVYCCKSKPKLLLTEISCWMYTGERQTSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSIAVIPGIAFAGCLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDAIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLSAFSKGKAAGYKLMEIIKQKPSIVEDTSDGKCLAEINGNIEFKDVNFSYPSRPDVMIFRNFSIFFPAGKTVAVVGGSGSGKSTVVALIERFYDPNEAGQVLLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAATTAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIQQGQVVETGTHEELIVKAGTYASLIRFQEMVGKRDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQFSTGADGRIEMISNAETDKKTPAPSGYFCRLLKLNAPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYRNFASMEKKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEDEHNSSLLAARLTTDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILATFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNSQNKILSLFCHELRIPQLQSLRKSQTSGLLFGLSQLALYASEALILWYGAHLVSRGVSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRPTRIDPDDPDAEPVETVRGEIELRHVDFAYPSRPDIMVFKDFNLRIRAGQSQALVGASGSGKSSVIALIERFYDPIGGKVMIDGKDVRKLNLRSLRLKIGLVQQEPALFAASIFDNIAYGKDGVTEAEVIEAAKAANVHAFVSGLPDGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDSIGVVQDGRIVEQGSHGELVSRPDGAYSRLLQLQHHHA* 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01455 1250 FunFam ABC transporter B family member 19 998 1247 - -
Pte13g01455 1250 CDD ABC_MTABC3_MDL1_MDL2 1008 1246 - -
Pte13g01455 1250 CDD ABC_6TM_Pgp_ABCB1_D2_like 675 991 - -
Pte13g01455 1250 CDD ABC_6TM_Pgp_ABCB1_D1_like 39 335 - -
Pte13g01455 1250 Pfam ABC transporter transmembrane region 44 312 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01455 1250 Pfam ABC transporter transmembrane region 686 957 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01455 1250 Gene3D ABC transporter type 1, transmembrane domain 975 997 IPR036640 GO:0005524|GO:0016020
Pte13g01455 1250 Pfam ABC transporter 381 530 IPR003439 GO:0005524
Pte13g01455 1250 Gene3D ABC transporter type 1, transmembrane domain 26 974 IPR036640 GO:0005524|GO:0016020
Pte13g01455 1250 PANTHER ABC TRANSPORTER B FAMILY 8 698 IPR039421 -
Pte13g01455 1250 Gene3D - 998 1247 IPR027417 -
Pte13g01455 1250 Gene3D - 352 601 IPR027417 -
Pte13g01455 1250 SMART AAA_5 389 582 IPR003593 GO:0016887
Pte13g01455 1250 SMART AAA_5 1035 1221 IPR003593 GO:0016887
Pte13g01455 1250 ProSitePatterns ABC transporters family signature. 502 516 IPR017871 GO:0005524|GO:0016887
Pte13g01455 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 104 327 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01455 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 362 599 IPR003439 GO:0005524
Pte13g01455 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 997 1246 IPR027417 -
Pte13g01455 1250 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 686 973 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte13g01455 1250 CDD ABC_MTABC3_MDL1_MDL2 362 600 - -
Pte13g01455 1250 ProSitePatterns ABC transporters family signature. 1147 1161 IPR017871 GO:0005524|GO:0016887
Pte13g01455 1250 SUPERFAMILY ABC transporter transmembrane region 667 995 IPR036640 GO:0005524|GO:0016020
Pte13g01455 1250 FunFam ABC transporter B family member 1 665 974 - -
Pte13g01455 1250 Pfam ABC transporter 1027 1175 IPR003439 GO:0005524
Pte13g01455 1250 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1010 1244 IPR003439 GO:0005524
Pte13g01455 1250 SUPERFAMILY ABC transporter transmembrane region 26 347 IPR036640 GO:0005524|GO:0016020
Pte13g01455 1250 FunFam ABC transporter B family member 1 26 361 - -
Pte13g01455 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 353 600 IPR027417 -
Pte13g01455 1250 FunFam ABC transporter B family member 19 352 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01455 Pte-Chr13 26502019 26509235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01455 8 1246 Calmodulin-binding Proteins AT2G36910 52.694 0.0 1317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01455 K05658 - gmx:100797124 2183.68