Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01454 ATGGCCTTCCCAACTCATAGCTTCATGTTTCAAAGTTTTCATGAAGATCAAGATCGCCTTCCACCCACTTCACTCAGCAATCTTCCATCATGTTCAACCCAAAACTTTCATGGTGGTGCCCCGTATATGATGAAGCGGTCGATGTCATTTTCAGGCATCGAGAACAAGCAGTGTGACGAAGGGCACGGTGATGATGAATTGTCAGATGATGGATCACAGCTTGGAGAGAAGAAGAAGAGGCTGAACACGGAACAGGTGAAAGCACTTGAGAAGAGCTTTGAGTTGGGGAACAAGCTTGAGCCAGAAAGGAAACTGCAACTGGCTAAGGCTCTTGGTATGCAGCCTAGGCAGATTGCTATATGGTTTCAGAACAGAAGAGCTAGATGGAAAACCAAGCAGTTGGAGAAAGACTACGAAGCACTCAAAATACAATTCGAAACATTGAAGGCTGACAATGATGCCCTTCACGCTCAGAACAAAAAGCTTCATGAAGAGTTATTGGCCCTGAAAGGACGAGATCACATTAACGAAGCTGCAACAAAAGGGCAGAAGAAGGAAAATGAAGGTACTTGGAGCAATGGGAGTGACAACAGTTCTGACAACTTAGAAGTATCGAGAAATCCTGTTATACACAGTTCAGTACCATCCCAAAATTTTAAAAGAATTGTGCCCTCAACCACAAGGCCAACTGGCATAACTCAATGCCACCAAGGCTCGACCAGATCGGATCTTCATGGCTTAAAACTAGATGACATAGTTCAAGTGGAAAGCTTCTGCAACATGTTTAATGGCATCGATGAACAGCAGCACAACTTTTGGCCATGGACTGAACAGATGCAACAATTCCATTGA 852 0.4413 MAFPTHSFMFQSFHEDQDRLPPTSLSNLPSCSTQNFHGGAPYMMKRSMSFSGIENKQCDEGHGDDELSDDGSQLGEKKKRLNTEQVKALEKSFELGNKLEPERKLQLAKALGMQPRQIAIWFQNRRARWKTKQLEKDYEALKIQFETLKADNDALHAQNKKLHEELLALKGRDHINEAATKGQKKENEGTWSNGSDNSSDNLEVSRNPVIHSSVPSQNFKRIVPSTTRPTGITQCHQGSTRSDLHGLKLDDIVQVESFCNMFNGIDEQQHNFWPWTEQMQQFH* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01454 283 FunFam Homeobox-leucine zipper protein ATHB-13 69 136 - -
Pte13g01454 283 MobiDBLite consensus disorder prediction 185 203 - -
Pte13g01454 283 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
Pte13g01454 283 MobiDBLite consensus disorder prediction 54 80 - -
Pte13g01454 283 MobiDBLite consensus disorder prediction 57 80 - -
Pte13g01454 283 Pfam Homeobox associated leucine zipper 132 171 IPR003106 GO:0006355|GO:0043565
Pte13g01454 283 SUPERFAMILY Homeodomain-like 66 134 IPR009057 -
Pte13g01454 283 MobiDBLite consensus disorder prediction 221 240 - -
Pte13g01454 283 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
Pte13g01454 283 MobiDBLite consensus disorder prediction 178 203 - -
Pte13g01454 283 PRINTS Lambda-repressor HTH signature 103 112 IPR000047 GO:0003677
Pte13g01454 283 PRINTS Lambda-repressor HTH signature 112 128 IPR000047 GO:0003677
Pte13g01454 283 Coils Coil 124 172 - -
Pte13g01454 283 SMART HOX_1 75 136 IPR001356 GO:0003677
Pte13g01454 283 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 46 274 IPR045224 GO:0003700
Pte13g01454 283 CDD homeodomain 77 133 IPR001356 GO:0003677
Pte13g01454 283 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Pte13g01454 283 Gene3D - 69 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01454 Pte-Chr13 26401081 26402904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01454 1 277 Homeobox Transcription Factor Family AT3G01220 52.797 5.34e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte13g01454 Homeodomain 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01454 K09338 - tcc:18601478 384.03