Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte13g01453 ATGGGATTGAATCCTGAAACAGTCCAGGCGGGTGGTCTGAGTAGGGGGAAATCAAAGCGAACAAATAAAAGAAACGATGAAGCTGCGGGTACAGGGTGGTGGTTGAAATTCAGGTTAATGGGAAGGTGCATGCCTTTTTTGTCTCAGTCCAAAAGGGCGAGCTCCTCCAATGGCAGTAGCACGCATGATGCTGAAAGCAAATCTACTAACGACACAGGGAGAGATCAACCAATTGCTCCAGTTGCAACACCTTCAACAAATAGCACTGTTGTAAGTATGCCATGCTCTCCCAACATAAGTGCTGAGCTAAAAGTCGCATCTCAACTTCGGAAGTTCTCGGTTAATGAACTCAAATTAGCGACGAGGAACTTCAGACCTGAGAATCTTCTTGGTGAGGGTGGCTTTGGACGTGTATACAAAGGCTGGATCAATGAGCATGGGATCAGTCTGGTCAAATCTGGAACAGGGATTGCAGTTGCAGTAAAGACACTTAATCACGACGGACTTCAGGGTCATAAAGAATGGCTTGCAGAAGTTAATTATCTTGGGGAACTTCTCCATCATAATTTAGTTAAATTAATAGGATACTGCATTGAGGATGATCAAAGATTACTTGTATATGAATTTATGGCTCGAGGAAGCTTGGAGAATCACCTTTTCAGAAGATCATTGCCCCTTCCTTGGGCCATGCGAATGAAGATAGCACTTGGTGCTGCGAAGGGCCTTGCCTTCCTTCATGAGGAAGCTGAAAAGCCGGTTATATTTCGTGATTTTAAAACTTCTAATATCCTGTTAGATATGGATTACAATGCCAAACTTTCTGATTTTGGACTTGCCAAAGACGGCCCTCAAGGAGACAACACTCATGTGTCCACTCGAGTGATGGGGACTTATGGCTATGCTGCTCCAGAGTACGTAATGACGGGACATCTTACGTCTAAAAGTGACGTTTACAGCTTTGGAGTGGTTTTGCTTGAAATGTTGACTGGCCTAAGATCCATGGACAAAAATCGGCCTAATGGAGCACACAACTTAGTGGAATGGGCACGTCCACAACTTGGTGACAGACGAAGATTCTATCGCCTCGTTGATCCTAGGCTGGAAGGTCATTTCTCAATTAAGGGTGCTCAAAAAGTAGTCCAGTTGGCTGCTCACTGCCTTAGTCGTGATCCCAAAGCCAGACCTCTAATGAGTGAAGTTGTTGAAATTCTCAAACTTCTTCCTAACCTGAAGGATATGGCTTATTCTTCATCATCCTTTCAGGCTATGCAAGTGGAGCGAATAACCTCCAGCCAACAAGCTAAAAGCTTTAACAGAATGCCTTCTGGGTTATCAAGGAATGGACCAGTAAACAAAGGTATTTCAAACGGTCCACCTGCCTCTCCTTATCGTCTCAACCATCCTCATAGGTCACCTAAACATAATAGTGCGAAACCTTGA 1440 0.4431 MGLNPETVQAGGLSRGKSKRTNKRNDEAAGTGWWLKFRLMGRCMPFLSQSKRASSSNGSSTHDAESKSTNDTGRDQPIAPVATPSTNSTVVSMPCSPNISAELKVASQLRKFSVNELKLATRNFRPENLLGEGGFGRVYKGWINEHGISLVKSGTGIAVAVKTLNHDGLQGHKEWLAEVNYLGELLHHNLVKLIGYCIEDDQRLLVYEFMARGSLENHLFRRSLPLPWAMRMKIALGAAKGLAFLHEEAEKPVIFRDFKTSNILLDMDYNAKLSDFGLAKDGPQGDNTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGLRSMDKNRPNGAHNLVEWARPQLGDRRRFYRLVDPRLEGHFSIKGAQKVVQLAAHCLSRDPKARPLMSEVVEILKLLPNLKDMAYSSSSFQAMQVERITSSQQAKSFNRMPSGLSRNGPVNKGISNGPPASPYRLNHPHRSPKHNSAKP* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte13g01453 479 FunFam Serine/threonine-protein kinase BIK1 92 209 - -
Pte13g01453 479 MobiDBLite consensus disorder prediction 49 91 - -
Pte13g01453 479 MobiDBLite consensus disorder prediction 430 454 - -
Pte13g01453 479 Pfam Protein tyrosine and serine/threonine kinase 128 404 IPR001245 GO:0004672|GO:0006468
Pte13g01453 479 MobiDBLite consensus disorder prediction 430 479 - -
Pte13g01453 479 Gene3D Transferase(Phosphotransferase) domain 1 210 431 - -
Pte13g01453 479 PANTHER OS01G0588500 PROTEIN-RELATED 62 406 - -
Pte13g01453 479 SUPERFAMILY Protein kinase-like (PK-like) 109 432 IPR011009 -
Pte13g01453 479 Gene3D Phosphorylase Kinase; domain 1 99 209 - -
Pte13g01453 479 FunFam Probable serine/threonine-protein kinase PBL8 210 424 - -
Pte13g01453 479 ProSitePatterns Protein kinases ATP-binding region signature. 130 162 IPR017441 GO:0005524
Pte13g01453 479 MobiDBLite consensus disorder prediction 1 27 - -
Pte13g01453 479 CDD STKc_IRAK 130 407 - -
Pte13g01453 479 ProSiteProfiles Protein kinase domain profile. 124 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte13g01453 Pte-Chr13 26287417 26290752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte13g01453 43 416 Glycoside Hydrolase AT3G07070 49.867 2.61e-114 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte13g01453 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte13g01453 - - vvi:100853083 714.916